Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Y_RNA.512-201ENST00000384518 102 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 SNORA41-201ENST00000384675 132 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 Y_RNA.556-201ENST00000384677 113 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 RNU6-823P-201ENST00000391042 103 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 RNU6-817P-201ENST00000391083 104 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 RNU6-1109P-201ENST00000391187 107 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 MIR1251-201ENST00000408552 70 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 RNU2-23P-201ENST00000410545 195 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 AC096664.2-201ENST00000411843 406 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 RPL21P90-201ENST00000415692 466 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 AL139247.1-201ENST00000422768 325 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 UBE2V1P4-201ENST00000425374 344 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 HMGB1P37-201ENST00000439613 609 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 FTH1P25-201ENST00000447665 469 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 RPS24P6-201ENST00000452670 400 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 RPL21P104-201ENST00000464143 478 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 AC068781.1-201ENST00000488231 618 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 SNORA31.3-201ENST00000516029 96 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 SNORD58B-201ENST00000607313 66 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 MIR3651-201ENST00000630427 90 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 Y_RNA.480-201ENST00000384364 102 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 MIR517A-201ENST00000385001 87 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 MIR513A2-201ENST00000385249 127 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 RPL7AP73-201ENST00000413490 353 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AC011742.1-201ENST00000431448 434 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AL353752.1-201ENST00000454946 260 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AC010285.1-201ENST00000470580 392 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AC104576.1-201ENST00000524225 88 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AC006023.2-201ENST00000609916 167 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 U2.1-201ENST00000618978 145 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 AL606534.2-204ENST00000635008 178 ntBASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM7Q9NR12 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.34□□□□□ -1.72
PDLIM7Q9NR12 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.39-201ENST00000362620 98 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RNU6-379P-201ENST00000363813 104 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RNU6-173P-201ENST00000364215 104 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RNU6-1329P-201ENST00000365664 107 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RHOT1P2-201ENST00000366423 333 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RNU6-1074P-201ENST00000383995 104 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AL158071.1-201ENST00000430315 461 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AC073063.1-201ENST00000434352 607 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AC099799.1-201ENST00000439809 192 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RPL9P32-201ENST00000464118 620 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RPL31P60-201ENST00000478450 367 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 MLLT10P2-201ENST00000506434 249 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RNU6-475P-201ENST00000516073 104 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RNU2-58P-201ENST00000516403 183 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 SNORA31.22-201ENST00000517204 135 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AC109446.1-201ENST00000566172 220 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AC005951.2-201ENST00000576282 495 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 RNU6-85P-201ENST00000605989 107 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 MIR4275-201ENST00000636486 87 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 MAPK10-253ENST00000641010 4072 ntBASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PDLIM7Q9NR12 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.307-201ENST00000365022 117 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 RNU6-76P-201ENST00000384060 104 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.424-201ENST00000384063 103 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 MIR578-201ENST00000384828 96 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 MIR199A2-201ENST00000385289 110 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 HMGB1P9-201ENST00000429856 646 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 CYCSP35-201ENST00000451978 304 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 PCNPP5-201ENST00000452246 481 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms