Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-143P-201ENST00000516942 93 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 CYCSP29-201ENST00000533731 318 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 TRAV37-201ENST00000553906 342 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 MIR3939-201ENST00000582614 106 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC012433.1-201ENST00000588916 398 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 MIR6830-201ENST00000636015 70 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC009812.4-201ENST00000569134 1805 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 RNU5A-1-201ENST00000362698 116 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 Y_RNA.526-201ENST00000384572 110 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 Y_RNA.562-201ENST00000384695 113 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 RPL21P38-201ENST00000418090 167 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 USP9YP7-201ENST00000436723 430 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AL590664.1-201ENST00000448065 339 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 FCF1P4-201ENST00000448326 183 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 TPT1P12-201ENST00000448968 492 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 USP9YP32-201ENST00000452432 430 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 IFNWP4-201ENST00000453148 294 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 TRBVB-201ENST00000477100 408 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 HSPE1P6-201ENST00000479457 291 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC098869.1-201ENST00000481627 292 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 RN7SL691P-201ENST00000494487 301 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 GZMAP1-201ENST00000503054 631 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AL592156.1-201ENST00000508758 304 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 RN7SKP122-201ENST00000515923 296 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 RNU6-138P-201ENST00000515952 107 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 RNU6-927P-201ENST00000516199 100 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 RNU6-111P-201ENST00000517179 105 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 TVP23BP1-201ENST00000557500 617 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 MIR4458-201ENST00000578872 75 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC002545.1-201ENST00000592511 181 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC098826.3-201ENST00000603823 466 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AL355810.1-201ENST00000614629 552 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 OR4G2P-202ENST00000641004 1759 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 AC093535.2-201ENST00000624769 2326 ntBASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SEC61A2Q9H9S3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 NOL8P1-201ENST00000508336 3529 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 SNORD27-201ENST00000363981 72 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 RNU6-1062P-201ENST00000383908 107 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AL591034.2-201ENST00000402839 359 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 MIR1179-201ENST00000408703 91 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AL513331.1-201ENST00000411908 397 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 RPL23AP26-201ENST00000412728 464 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC007098.1-201ENST00000420122 367 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AL157831.1-201ENST00000426134 473 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AL159987.2-201ENST00000432754 307 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC091390.1-201ENST00000433904 331 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC010618.1-201ENST00000469924 477 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC104164.2-201ENST00000496953 495 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 HMGN1P11-201ENST00000508668 303 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 FTH1P9-201ENST00000513251 355 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 RNA5SP519-201ENST00000516480 119 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AL157871.3-201ENST00000557231 293 ntBASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.75□□□□□ -1.81
SEC61A2Q9H9S3 MIR1273C-201ENST00000578669 77 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms