Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.56□□□□□ -2
RNF41Q9H4P4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.56□□□□□ -2
RNF41Q9H4P4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.56□□□□□ -2
RNF41Q9H4P4 AC096638.1-201ENST00000444678 216 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 USP9YP29-201ENST00000445112 563 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 Z96811.1-201ENST00000445880 108 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.56□□□□□ -2
RNF41Q9H4P4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.56□□□□□ -2
RNF41Q9H4P4 snoU13.28-201ENST00000459235 104 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 MTCO2P29-201ENST00000465212 189 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.56□□□□□ -2
RNF41Q9H4P4 AL160314.1-201ENST00000490836 438 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.56□□□□□ -2
RNF41Q9H4P4 ANXA2P1-201ENST00000505539 926 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.56□□□□□ -2
RNF41Q9H4P4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.56□□□□□ -2
RNF41Q9H4P4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.56□□□□□ -2
RNF41Q9H4P4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.56□□□□□ -2
RNF41Q9H4P4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.56□□□□□ -2
RNF41Q9H4P4 AC119751.7-201ENST00000600494 245 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 AC073544.2-201ENST00000601155 540 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 AC007363.1-201ENST00000604736 620 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 AC019159.1-201ENST00000605094 187 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 AC087752.4-201ENST00000605911 462 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 AC107294.1-201ENST00000609524 467 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 FTX_3.1-201ENST00000610451 147 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.56□□□□□ -2
RNF41Q9H4P4 TEX21P-201ENST00000447107 1476 ntBASIC2.56□□□□□ -2
RNF41Q9H4P4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RNF41Q9H4P4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.56□□□□□ -2
RNF41Q9H4P4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RNF41Q9H4P4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RNF41Q9H4P4 RNU6-960P-201ENST00000364056 120 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RNF41Q9H4P4 SNORA75-201ENST00000384158 137 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AL365496.1-201ENST00000426885 215 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.55□□□□□ -2
RNF41Q9H4P4 ELOCP14-201ENST00000428070 331 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.55□□□□□ -2
RNF41Q9H4P4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.55□□□□□ -2
RNF41Q9H4P4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.55□□□□□ -2
RNF41Q9H4P4 AC104850.1-201ENST00000435940 476 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 ELOCP7-201ENST00000439968 331 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.55□□□□□ -2
RNF41Q9H4P4 SNORD97-201ENST00000459187 142 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 TRBV12-1-201ENST00000479785 344 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.55□□□□□ -2
RNF41Q9H4P4 RNU2-10P-201ENST00000516375 211 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 Y_RNA.695-201ENST00000516715 107 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.55□□□□□ -2
RNF41Q9H4P4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.55□□□□□ -2
RNF41Q9H4P4 ATP5F1P5-201ENST00000526403 760 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.55□□□□□ -2
RNF41Q9H4P4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.55□□□□□ -2
RNF41Q9H4P4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.55□□□□□ -2
RNF41Q9H4P4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.55□□□□□ -2
RNF41Q9H4P4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.55□□□□□ -2
RNF41Q9H4P4 AC068135.2-201ENST00000569293 1028 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AC098826.3-201ENST00000603823 466 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AL161798.1-201ENST00000604630 131 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AC090578.1-201ENST00000604955 591 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AC135507.1-201ENST00000607214 561 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AP001506.1-201ENST00000615444 211 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 AC009509.4-201ENST00000619202 509 ntBASIC2.55□□□□□ -2
RNF41Q9H4P4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.55□□□□□ -2
RNF41Q9H4P4 AC022336.2-201ENST00000568966 2538 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF41Q9H4P4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF41Q9H4P4 CR848007.1-201ENST00000442354 1699 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 RNU6-1167P-201ENST00000363227 94 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 RNU6-169P-201ENST00000365336 107 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 RNU6-39P-201ENST00000384344 107 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 RNU6-348P-201ENST00000384386 107 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 RNU6-140P-201ENST00000384566 108 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 RAC1P6-201ENST00000423911 575 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 ISCA1P1-201ENST00000426679 387 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AC093106.2-201ENST00000428212 385 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.54□□□□□ -2
RNF41Q9H4P4 CR769767.1-201ENST00000436337 346 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 MTCO2P16-201ENST00000436962 677 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.54□□□□□ -2
RNF41Q9H4P4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.54□□□□□ -2
RNF41Q9H4P4 MTND2P22-201ENST00000444325 1033 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 UBBP3-201ENST00000445497 241 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 FABP5P15-201ENST00000453566 214 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.54□□□□□ -2
RNF41Q9H4P4 NDUFB4P2-201ENST00000509515 391 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 RNU6-1092P-201ENST00000516955 87 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 RNU6-1220P-201ENST00000517126 108 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.54□□□□□ -2
RNF41Q9H4P4 AC022616.3-201ENST00000523940 148 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.54□□□□□ -2
RNF41Q9H4P4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.54□□□□□ -2
RNF41Q9H4P4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.54□□□□□ -2
RNF41Q9H4P4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.54□□□□□ -2
RNF41Q9H4P4 AC009163.5-201ENST00000575421 637 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.54□□□□□ -2
RNF41Q9H4P4 PIGPP4-201ENST00000584447 307 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms