Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RNU6-1197P-201ENST00000391183 107 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNU6-903P-201ENST00000391270 109 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 U3.42-201ENST00000408746 214 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS16Q9H269 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS16Q9H269 BX842559.1-201ENST00000419615 532 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS16Q9H269 HSPE1P1-201ENST00000421494 318 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AC093106.2-201ENST00000428212 385 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS16Q9H269 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS16Q9H269 BRK1P2-201ENST00000442875 223 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AC115115.1-201ENST00000449927 248 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RBMY2UP-201ENST00000453474 324 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNU7-182P-201ENST00000459009 62 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RPL37P6-201ENST00000460682 294 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RPL21P99-201ENST00000480369 423 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS16Q9H269 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS16Q9H269 RN7SKP256-201ENST00000517201 314 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNA5SP291-201ENST00000517222 105 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RPL7P20-201ENST00000520308 745 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 IGHV3-76-201ENST00000522465 295 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 OR5B10P-201ENST00000532869 642 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS16Q9H269 MIR4775-201ENST00000581168 75 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 MIR3171-201ENST00000584270 74 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS16Q9H269 MIR4424-201ENST00000585257 86 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AP000942.4-201ENST00000604811 241 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS16Q9H269 AC034102.8-201ENST00000615146 484 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 SNORD39.4-201ENST00000620099 78 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AC134503.1-201ENST00000633048 54 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS16Q9H269 AC005183.1-201ENST00000603687 1979 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS16Q9H269 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS16Q9H269 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS16Q9H269 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
VPS16Q9H269 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS16Q9H269 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
VPS16Q9H269 AC007256.1-201ENST00000392253 2765 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 RNA5SP119-201ENST00000362715 117 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 SNORA62.1-201ENST00000364287 154 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 SNORA63C-201ENST00000364578 129 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 SNORA73.2-201ENST00000364946 201 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 SNORD42.2-201ENST00000365570 69 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS16Q9H269 Y_RNA.384-201ENST00000383909 102 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 MIR606-201ENST00000384851 96 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 SNORD37.1-201ENST00000390968 65 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 RN7SKP111-201ENST00000410349 271 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 RNA5SP293-201ENST00000410527 113 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 RNU6-387P-201ENST00000411331 105 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS16Q9H269 AC114491.1-201ENST00000416095 246 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS16Q9H269 HSPD1P21-201ENST00000436541 245 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS16Q9H269 AL118520.1-201ENST00000450770 291 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 FAM206BP-201ENST00000510179 541 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 RNU6-677P-201ENST00000516914 101 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 ELOCP31-201ENST00000540463 467 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS16Q9H269 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS16Q9H269 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS16Q9H269 AL118558.2-201ENST00000556294 238 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 POLR3GP2-201ENST00000588366 668 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 AC007619.2-201ENST00000605743 379 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS16Q9H269 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 AC073476.4-201ENST00000628409 72 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 U6.114-201ENST00000636407 96 ntBASIC3.61□□□□□ -1.83
VPS16Q9H269 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS16Q9H269 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS16Q9H269 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS16Q9H269 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS16Q9H269 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS16Q9H269 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS16Q9H269 U3.12-201ENST00000364498 214 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 Y_RNA.259-201ENST00000364619 101 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 Y_RNA.301-201ENST00000364990 103 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 RNU6-741P-201ENST00000383889 107 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 RNU6-43P-201ENST00000384302 107 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 SNORA24.1-201ENST00000384401 135 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 SNORD116-29-201ENST00000384516 83 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 RNU6-14P-201ENST00000384630 106 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS16Q9H269 SNORA48.8-201ENST00000391324 134 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 AL591034.1-201ENST00000407447 340 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 MIR548P-201ENST00000408336 84 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 RNU4-26P-201ENST00000410270 107 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 RNU4-14P-201ENST00000410858 122 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 UBE2D3P2-201ENST00000424409 445 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 AC091390.3-201ENST00000426478 338 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms