Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU4-20P-201ENST00000365601 151 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDT1Q9H211 RNU6-14P-201ENST00000384630 106 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDT1Q9H211 AL356432.1-201ENST00000405809 419 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 Y_RNA.615-201ENST00000410769 117 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.33□□□□□ -1.88
CDT1Q9H211 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.33□□□□□ -1.88
CDT1Q9H211 AL513185.2-201ENST00000425543 193 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.33□□□□□ -1.88
CDT1Q9H211 AC093019.1-201ENST00000443135 252 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 DDX3P2-201ENST00000446138 111 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AL356010.1-201ENST00000456364 102 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.33□□□□□ -1.88
CDT1Q9H211 RPS29P15-201ENST00000458329 171 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 RNU7-63P-201ENST00000459054 62 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AL163973.1-201ENST00000484753 577 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.33□□□□□ -1.88
CDT1Q9H211 AC092436.1-201ENST00000506450 503 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AC108078.2-201ENST00000510750 236 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 SNORA64.4-201ENST00000516632 81 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AP002404.1-201ENST00000532005 451 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 MIR4775-201ENST00000581168 75 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AC011712.1-201ENST00000588959 234 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AC007998.5-201ENST00000622938 237 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 AC025034.2-201ENST00000623264 286 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDT1Q9H211 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.33□□□□□ -1.88
CDT1Q9H211 AL137003.2-201ENST00000606924 2538 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDT1Q9H211 MTND5P17-201ENST00000418405 1603 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDT1Q9H211 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.33□□□□□ -1.88
CDT1Q9H211 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDT1Q9H211 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDT1Q9H211 NACAP2-201ENST00000318548 624 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 Y_RNA.58-201ENST00000362807 102 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 Y_RNA.154-201ENST00000363624 102 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 RNU4-76P-201ENST00000364509 141 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 RNY3P1-201ENST00000365085 102 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 RNU6-996P-201ENST00000365438 107 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 RNY3-201ENST00000365484 102 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 RNU6-61P-201ENST00000365528 109 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 Y_RNA.490-201ENST00000384413 102 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AL162578.1-201ENST00000406202 378 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AL591034.1-201ENST00000407447 340 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.32□□□□□ -1.88
CDT1Q9H211 YPEL5P1-201ENST00000419731 367 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.32□□□□□ -1.88
CDT1Q9H211 RPL27AP8-201ENST00000424277 446 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.32□□□□□ -1.88
CDT1Q9H211 RPL36AP6-201ENST00000435770 321 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 CALM1P1-201ENST00000442082 433 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 RNU7-182P-201ENST00000459009 62 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 RN7SL442P-201ENST00000473804 320 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDT1Q9H211 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.32□□□□□ -1.88
CDT1Q9H211 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.32□□□□□ -1.88
CDT1Q9H211 AP005435.4-201ENST00000529514 284 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDT1Q9H211 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDT1Q9H211 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.32□□□□□ -1.88
CDT1Q9H211 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.32□□□□□ -1.88
CDT1Q9H211 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.32□□□□□ -1.88
CDT1Q9H211 AC044792.1-201ENST00000593294 196 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AC021646.1-201ENST00000605469 484 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AC087045.1-201ENST00000605856 382 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AC090132.2-201ENST00000615881 347 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 AL136221.1-201ENST00000621449 509 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 ASNSP3-201ENST00000451989 1306 ntBASIC3.32□□□□□ -1.88
CDT1Q9H211 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CDT1Q9H211 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDT1Q9H211 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDT1Q9H211 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CDT1Q9H211 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CDT1Q9H211 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 SNORA71.1-201ENST00000364523 117 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 Y_RNA.394-201ENST00000383942 103 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 SNORA44-201ENST00000384584 132 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AL122016.1-201ENST00000403365 367 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AL139397.2-201ENST00000404529 772 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AL513331.1-201ENST00000411908 397 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 SRIP2-201ENST00000428470 166 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 CBWD4P-201ENST00000445695 655 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.31□□□□□ -1.88
CDT1Q9H211 AL118520.1-201ENST00000450770 291 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.31□□□□□ -1.88
CDT1Q9H211 MTND3P16-201ENST00000452205 344 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.31□□□□□ -1.88
CDT1Q9H211 AL162395.1-201ENST00000457882 422 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 RPS23P3-201ENST00000470993 430 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AC117440.1-201ENST00000474107 571 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 RN7SL20P-201ENST00000488827 297 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 TTC39CP1-201ENST00000512513 755 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.31□□□□□ -1.88
CDT1Q9H211 SCARNA15.2-201ENST00000516409 127 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 RNU6-1256P-201ENST00000516539 103 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDT1Q9H211 OR5BN1P-201ENST00000532955 829 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms