Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 MTND5P7-201ENST00000413558 1798 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 RNU6-1329P-201ENST00000365664 107 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 RPL21P1-201ENST00000399532 476 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AL645568.3-201ENST00000433683 316 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 OR2AQ1P-201ENST00000451972 200 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 SNORA84-201ENST00000459229 133 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 RN7SL132P-201ENST00000478131 296 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 RNU7-143P-201ENST00000516781 65 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 IGHV3-76-201ENST00000522465 295 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC040926.1-201ENST00000530195 238 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 SUB1P3-201ENST00000564581 315 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC025627.2-201ENST00000576220 160 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC174048.1-201ENST00000603389 144 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 Z98751.3-201ENST00000604447 521 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 MIR15A-201ENST00000607334 83 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 MIR4272-201ENST00000635924 64 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 LINC02471-203ENST00000641941 4752 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 AC233263.6-201ENST00000631132 1963 ntBASIC4.22□□□□□ -1.73
RNF38Q9H0F5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF38Q9H0F5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF38Q9H0F5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.21□□□□□ -1.73
RNF38Q9H0F5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.21□□□□□ -1.73
RNF38Q9H0F5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.21□□□□□ -1.73
RNF38Q9H0F5 AC116096.1-201ENST00000566804 2314 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 SNORA60-201ENST00000362396 134 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.477-201ENST00000384352 108 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 RNU6-790P-201ENST00000384479 105 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 MT-TW-201ENST00000387382 68 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 RN7SKP202-201ENST00000410439 330 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 RNU2-38P-201ENST00000410856 79 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 BX842559.1-201ENST00000419615 532 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 PCMTD1P1-201ENST00000455560 355 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 RNU6-1132P-201ENST00000459214 107 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 RPL21P41-201ENST00000459863 264 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 RN7SL542P-201ENST00000467147 294 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AC023632.4-201ENST00000517783 191 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AC120057.2-201ENST00000571520 271 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 MIR5188-201ENST00000583467 113 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 AP002826.1-201ENST00000608835 315 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.21□□□□□ -1.74
RNF38Q9H0F5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF38Q9H0F5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 RNU6-50P-201ENST00000362356 103 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.26-201ENST00000362539 101 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.60-201ENST00000362831 98 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.350-201ENST00000365409 98 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 RNU6-213P-201ENST00000384051 104 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.483-201ENST00000384380 101 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 SNORA48.7-201ENST00000391302 135 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 MIR548I3-201ENST00000408378 149 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 MIR548I1-201ENST00000408810 149 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 CYCSP19-201ENST00000411715 316 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 CRYBB2P1-203ENST00000415709 538 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 AL133396.1-201ENST00000432048 687 ntBASIC4.2□□□□□ -1.74
RNF38Q9H0F5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF38Q9H0F5 RPS3AP12-201ENST00000443616 753 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms