Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP44Q9H0E7 RNU6-1120P-201ENST00000362988 108 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RNU6-799P-201ENST00000363567 107 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RNU6-270P-201ENST00000364131 105 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RNU6-188P-201ENST00000364207 107 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RNU6-606P-201ENST00000384721 111 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RNU6-192P-201ENST00000391253 100 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.29□□□□□ -1.88
USP44Q9H0E7 RPLP0P7-201ENST00000416050 667 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 AC099548.1-201ENST00000421443 426 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 ARL5AP4-201ENST00000430731 512 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 MTCO2P11-201ENST00000431069 680 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.29□□□□□ -1.88
USP44Q9H0E7 DDX3P2-201ENST00000446138 111 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 MRPL50P4-201ENST00000446432 475 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RPS3P1-201ENST00000456781 192 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 snoU13.28-201ENST00000459235 104 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RPL21P8-201ENST00000465083 535 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.29□□□□□ -1.88
USP44Q9H0E7 AC079382.1-201ENST00000493346 557 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 AC108078.1-201ENST00000508073 725 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 RNU6-928P-201ENST00000516876 104 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 OR5BN1P-201ENST00000532955 829 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 AC004805.2-201ENST00000605382 482 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 AC022893.3-201ENST00000607665 437 ntBASIC3.29□□□□□ -1.88
USP44Q9H0E7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.29□□□□□ -1.88
USP44Q9H0E7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
USP44Q9H0E7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.29□□□□□ -1.88
USP44Q9H0E7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP44Q9H0E7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.28□□□□□ -1.88
USP44Q9H0E7 RNU6-74P-201ENST00000384235 107 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 RNU6-456P-201ENST00000384493 107 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 MIR454-201ENST00000390180 115 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 RNU1-101P-201ENST00000391171 127 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AL031121.1-201ENST00000406553 254 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 RPL26P27-201ENST00000414397 437 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.28□□□□□ -1.88
USP44Q9H0E7 TIMM9P3-201ENST00000428659 274 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC073464.1-201ENST00000429823 534 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.28□□□□□ -1.88
USP44Q9H0E7 AL714022.1-201ENST00000439897 151 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC011816.1-201ENST00000441346 546 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 CACYBPP2-201ENST00000453625 678 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 GMFBP1-201ENST00000467831 427 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC096725.1-201ENST00000514266 313 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 RNA5SP471-201ENST00000516971 106 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 MTCYBP20-201ENST00000524239 1129 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.28□□□□□ -1.88
USP44Q9H0E7 AP003034.1-201ENST00000534621 422 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC243972.3-201ENST00000539655 198 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AL021997.1-201ENST00000605757 193 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 AC004492.1-201ENST00000607036 742 ntBASIC3.28□□□□□ -1.88
USP44Q9H0E7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USP44Q9H0E7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USP44Q9H0E7 RNU6-512P-201ENST00000364438 103 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 RNU4-48P-201ENST00000365559 182 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 RNU6-1215P-201ENST00000384441 102 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 Y_RNA.534-201ENST00000384599 112 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 USP9YP20-201ENST00000419224 558 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 HMGN2P30-201ENST00000423237 256 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AL451074.3-201ENST00000437709 472 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 MTND1P34-201ENST00000438556 671 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 MTATP6P7-201ENST00000453315 681 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 RNU7-182P-201ENST00000459009 62 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 RPL9P6-201ENST00000492764 598 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AC107401.1-201ENST00000503426 685 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 AC108078.2-201ENST00000510750 236 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 RNA5SP76-201ENST00000516277 87 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 RNA5SP165-201ENST00000517142 115 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 AP001646.1-201ENST00000527936 915 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.27□□□□□ -1.89
USP44Q9H0E7 NRBF2P5-201ENST00000603087 788 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AC080078.2-201ENST00000603766 501 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 SEPT14P19-203ENST00000633205 211 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 U6.114-201ENST00000636407 96 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AC099654.12-201ENST00000639868 649 ntBASIC3.27□□□□□ -1.89
USP44Q9H0E7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms