Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 AC006600.1-201ENST00000572529 153 ntBASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 MIR1273C-201ENST00000578669 77 ntBASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 MIR4458-201ENST00000578872 75 ntBASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 VN1R91P-201ENST00000594377 169 ntBASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 uc_338.13-201ENST00000618243 179 ntBASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 FP236240.3-201ENST00000623061 327 ntBASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 AL512643.1-201ENST00000635735 524 ntBASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXP3Q9BZS1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 RNU6-1074P-201ENST00000383995 104 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 RPS26P8-201ENST00000393490 348 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 MIR1302-6-201ENST00000408466 90 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 ELOCP20-201ENST00000422460 345 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC006946.1-201ENST00000429106 328 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 RPS3AP12-201ENST00000443616 753 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 FCF1P4-201ENST00000448326 183 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 UQCRHP4-201ENST00000471686 272 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 VN1R104P-201ENST00000505115 1009 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AL592156.1-201ENST00000508758 304 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 NDUFB4P9-201ENST00000511646 388 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 SNORA25.11-201ENST00000515935 105 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 MIR892C-201ENST00000516410 77 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.687-201ENST00000516558 91 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 RNA5SP471-201ENST00000516971 106 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AL360157.1-201ENST00000565962 87 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 RAC1P9-201ENST00000604990 392 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC123912.5-201ENST00000605470 343 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC107294.1-201ENST00000609524 467 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC141273.2-201ENST00000618989 130 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 AC138627.2-201ENST00000624202 601 ntBASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXP3Q9BZS1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 RNY3P11-201ENST00000364153 102 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 U8.8-201ENST00000365399 135 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.483-201ENST00000384380 101 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 RNU6-933P-201ENST00000384424 107 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 MIR625-201ENST00000385047 85 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 MIR301A-201ENST00000385261 86 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AL591034.2-201ENST00000402839 359 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AL513475.1-201ENST00000406602 315 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 MIR1183-201ENST00000408856 89 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC011742.1-201ENST00000431448 434 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 CEACAMP4-201ENST00000457676 421 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 FO393415.2-201ENST00000480085 343 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC091167.1-201ENST00000492017 396 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 HMGN1P11-201ENST00000508668 303 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC107016.1-201ENST00000550463 337 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC025884.1-201ENST00000556034 378 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AL157871.3-201ENST00000557231 293 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 MIR3976-201ENST00000606807 139 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 AC006023.2-201ENST00000609916 167 ntBASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXP3Q9BZS1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms