Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNA5SP38-201ENST00000410750 119 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC002075.2-201ENST00000425207 252 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 HMGB1P9-201ENST00000429856 646 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 FTH1P25-201ENST00000447665 469 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 RN7SL330P-201ENST00000469709 307 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 HMGB1P30-201ENST00000492455 606 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 UBL5P2-201ENST00000583788 219 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 HSPE1P7-201ENST00000604681 321 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC244205.2-202ENST00000635781 342 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 MIR622-201ENST00000638396 96 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC233263.6-201ENST00000631132 1963 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 MIR591-201ENST00000385290 95 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 AC126124.2-201ENST00000413542 321 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 MTCO3P18-201ENST00000440206 761 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 RNU7-180P-201ENST00000459240 63 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 RPL21P41-201ENST00000459863 264 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 BNIP3P6-201ENST00000549284 499 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 Z82243.1-201ENST00000609432 473 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 PLCE1P1-201ENST00000622094 305 ntBASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
RTFDC1Q9BY42 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 MTND4P35-201ENST00000604257 1375 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 RNU6-451P-201ENST00000362921 107 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 SNORA5B-201ENST00000363786 132 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 RN7SKP220-201ENST00000410611 288 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 RNU6-1025P-201ENST00000410629 104 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 MTND1P2-201ENST00000430604 821 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 RPL23AP67-201ENST00000465341 474 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC128713.1-201ENST00000471495 306 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 SUMO2P6-201ENST00000505273 288 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 PRDX4P1-201ENST00000507189 574 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC008716.1-201ENST00000511084 513 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 NACAP3-201ENST00000552100 481 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AP000907.4-201ENST00000604143 237 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 uc_338.1-201ENST00000612113 180 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC004852.3-201ENST00000614131 326 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 AC004520.1-201ENST00000608362 1413 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 ASNSP3-201ENST00000451989 1306 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 OR4G1P-203ENST00000641984 1631 ntBASIC3.92□□□□□ -1.78
RTFDC1Q9BY42 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 MIR412-201ENST00000362142 91 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 Y_RNA.38-201ENST00000362617 102 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 RNU6-82P-201ENST00000363970 107 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 SNORA4.3-201ENST00000365564 137 ntBASIC3.91□□□□□ -1.78
RTFDC1Q9BY42 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms