Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNU4-80P-201ENST00000363200 141 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 RNU1-132P-201ENST00000364300 164 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 SNORA2.3-201ENST00000383920 135 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 RNU6-339P-201ENST00000384310 107 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 RAB9AP3-201ENST00000412737 573 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AC092447.6-201ENST00000414578 210 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 BTF3P11-201ENST00000426582 477 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 RPS15AP5-201ENST00000436276 388 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 Z82210.1-201ENST00000440037 231 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 RAB9AP1-201ENST00000449393 573 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 RPS29P2-201ENST00000479278 136 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AC091868.1-201ENST00000508746 304 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 APOOP4-201ENST00000513530 597 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 SCARNA20.4-201ENST00000516969 131 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AL157871.3-201ENST00000557231 293 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AL139395.1-201ENST00000603662 160 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AP001340.1-201ENST00000624405 217 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AC104964.3-201ENST00000606115 2860 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AL161912.2-201ENST00000565707 3007 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 LINC01109-201ENST00000603837 3081 ntBASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL25A1Q9BXS0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 AC016745.2-201ENST00000608834 3443 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 RNA5SP52-201ENST00000362448 134 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 RNU6-428P-201ENST00000362942 107 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 RNU6-395P-201ENST00000365662 106 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 RNU6-381P-201ENST00000391259 108 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 RPL11P3-201ENST00000395256 523 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 AC096638.1-201ENST00000444678 216 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 AC022431.1-201ENST00000450941 438 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 RPL23AP75-201ENST00000491601 451 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 NDUFA5P6-201ENST00000542110 379 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 HMGB1P14-201ENST00000557424 591 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 AC022968.1-201ENST00000567372 442 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 RMST_6.1-201ENST00000611980 203 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 U4.7-201ENST00000638126 106 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 AC009093.8-201ENST00000641769 292 ntBASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL25A1Q9BXS0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 AC093591.2-201ENST00000565254 3843 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 MIR133A2-201ENST00000347538 102 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 SNORD115-32-201ENST00000364079 82 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 SNORA71.2-201ENST00000364941 134 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 RNU6-578P-201ENST00000390980 103 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 RN7SKP17-201ENST00000411242 351 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 ABCF2P2-201ENST00000450549 296 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 RPS20P10-201ENST00000451209 253 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 HSPE1P5-201ENST00000561489 272 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 AC022441.3-201ENST00000605737 136 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms