Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC080013.2-201ENST00000460866 323 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 MRPL42P6-201ENST00000486397 371 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AC106872.3-201ENST00000495104 446 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 GZMAP1-201ENST00000503054 631 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXC2Q99958 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXC2Q99958 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXC2Q99958 AC108729.3-201ENST00000513484 108 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.01□□□□□ -2.09
FOXC2Q99958 SNORA3.4-201ENST00000515969 96 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXC2Q99958 MTATP6P15-201ENST00000527233 835 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXC2Q99958 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXC2Q99958 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXC2Q99958 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXC2Q99958 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXC2Q99958 MIR3199-1-201ENST00000582434 88 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 MIR4307-201ENST00000582802 84 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXC2Q99958 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXC2Q99958 DPPA3P3-201ENST00000603842 430 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AC010297.1-201ENST00000623948 149 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 CR381653.2-201ENST00000624041 768 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AC007671.2-201ENST00000637344 619 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
FOXC2Q99958 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXC2Q99958 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXC2Q99958 MTND5P30-201ENST00000452896 1731 ntBASIC2□□□□□ -2.09
FOXC2Q99958 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
FOXC2Q99958 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2□□□□□ -2.09
FOXC2Q99958 Y_RNA.97-201ENST00000363094 102 ntBASIC2□□□□□ -2.09
FOXC2Q99958 RNU6-14P-201ENST00000384630 106 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AL021407.1-201ENST00000404531 386 ntBASIC2□□□□□ -2.09
FOXC2Q99958 VPS26BP1-201ENST00000417155 755 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AL109913.1-201ENST00000421173 514 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC011233.1-201ENST00000422812 283 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2□□□□□ -2.09
FOXC2Q99958 RPL7P34-201ENST00000433316 712 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2□□□□□ -2.09
FOXC2Q99958 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2□□□□□ -2.09
FOXC2Q99958 AL139109.1-201ENST00000455491 297 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC055855.1-201ENST00000489563 579 ntBASIC2□□□□□ -2.09
FOXC2Q99958 RPF2P2-201ENST00000504693 896 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2□□□□□ -2.09
FOXC2Q99958 MTND1P22-201ENST00000510572 951 ntBASIC2□□□□□ -2.09
FOXC2Q99958 RNU6-1053P-201ENST00000515930 101 ntBASIC2□□□□□ -2.09
FOXC2Q99958 SNORA31.3-201ENST00000516029 96 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC025881.1-201ENST00000518851 512 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AP005902.1-201ENST00000521358 186 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2□□□□□ -2.09
FOXC2Q99958 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2□□□□□ -2.09
FOXC2Q99958 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2□□□□□ -2.09
FOXC2Q99958 MIR4498-201ENST00000577599 66 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AP001004.1-201ENST00000582468 324 ntBASIC2□□□□□ -2.09
FOXC2Q99958 MIR5092-201ENST00000583139 88 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC060766.3-201ENST00000591442 263 ntBASIC2□□□□□ -2.09
FOXC2Q99958 RPS15AP11-201ENST00000594193 385 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC091152.3-201ENST00000604227 325 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC112187.2-201ENST00000604345 283 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AL049779.4-201ENST00000604500 156 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC087683.2-201ENST00000611384 326 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC011939.3-201ENST00000613686 466 ntBASIC2□□□□□ -2.09
FOXC2Q99958 AC245884.12-201ENST00000615364 59 ntBASIC2□□□□□ -2.09
FOXC2Q99958 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
FOXC2Q99958 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
FOXC2Q99958 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 UBE2L2-201ENST00000254302 429 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 AL356292.1-201ENST00000283110 373 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 Y_RNA.140-201ENST00000363474 103 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 RNU6-660P-201ENST00000364566 109 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 MIR218-1-201ENST00000384999 110 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
FOXC2Q99958 SNORA26.9-201ENST00000391322 122 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 MIR1287-201ENST00000408492 90 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 RNA5SP181-201ENST00000410246 98 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 ZNF90P2-204ENST00000419323 1075 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.99□□□□□ -2.09
FOXC2Q99958 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 AL353729.1-201ENST00000425044 720 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 AC011753.1-201ENST00000451001 220 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.99□□□□□ -2.09
FOXC2Q99958 RPL37P6-201ENST00000460682 294 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 LINC00888-204ENST00000487386 421 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
FOXC2Q99958 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 AC026436.1-201ENST00000510537 270 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 MRPS33P3-201ENST00000513456 322 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 RNU6-64P-201ENST00000517119 105 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 HMGB1P41-201ENST00000520234 440 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 AC006199.1-201ENST00000548728 219 ntBASIC1.99□□□□□ -2.09
FOXC2Q99958 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.99□□□□□ -2.09
FOXC2Q99958 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.99□□□□□ -2.09
FOXC2Q99958 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms