Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.66□□□□□ -1.82
SMOQ99835 IGKV2-26-201ENST00000518305 343 ntBASIC3.66□□□□□ -1.82
SMOQ99835 IGKV2-23-201ENST00000518729 323 ntBASIC3.66□□□□□ -1.82
SMOQ99835 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.66□□□□□ -1.82
SMOQ99835 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.66□□□□□ -1.82
SMOQ99835 AL355365.1-201ENST00000616480 294 ntBASIC3.66□□□□□ -1.82
SMOQ99835 AC126177.8-201ENST00000618339 1015 ntBASIC3.66□□□□□ -1.82
SMOQ99835 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.66□□□□□ -1.82
SMOQ99835 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
SMOQ99835 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SMOQ99835 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SMOQ99835 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.66□□□□□ -1.82
SMOQ99835 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.82
SMOQ99835 AP001486.2-201ENST00000561652 5113 ntBASIC3.65□□□□□ -1.82
SMOQ99835 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SMOQ99835 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
SMOQ99835 FAM35DP-201ENST00000323387 2712 ntBASIC3.65□□□□□ -1.82
SMOQ99835 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SMOQ99835 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.65□□□□□ -1.83
SMOQ99835 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SMOQ99835 MIR208A-201ENST00000362287 71 ntBASIC3.65□□□□□ -1.83
SMOQ99835 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMOQ99835 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMOQ99835 Y_RNA.579-201ENST00000390939 94 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.83
SMOQ99835 RPL37P10-201ENST00000412884 288 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AL139396.1-201ENST00000421137 167 ntBASIC3.65□□□□□ -1.83
SMOQ99835 FABP5P14-201ENST00000437273 393 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.65□□□□□ -1.83
SMOQ99835 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.65□□□□□ -1.83
SMOQ99835 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.65□□□□□ -1.83
SMOQ99835 CEACAMP4-201ENST00000457676 421 ntBASIC3.65□□□□□ -1.83
SMOQ99835 RPS20P22-201ENST00000473700 357 ntBASIC3.65□□□□□ -1.83
SMOQ99835 RPL31P13-201ENST00000484151 370 ntBASIC3.65□□□□□ -1.83
SMOQ99835 RPS15AP34-201ENST00000487776 387 ntBASIC3.65□□□□□ -1.83
SMOQ99835 RPS27P27-201ENST00000498779 255 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.65□□□□□ -1.83
SMOQ99835 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.65□□□□□ -1.83
SMOQ99835 RNU6-1332P-201ENST00000516666 104 ntBASIC3.65□□□□□ -1.83
SMOQ99835 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.65□□□□□ -1.83
SMOQ99835 RNU6-323P-201ENST00000521915 107 ntBASIC3.65□□□□□ -1.83
SMOQ99835 CYCSP27-201ENST00000527643 293 ntBASIC3.65□□□□□ -1.83
SMOQ99835 APOOP3-201ENST00000536787 586 ntBASIC3.65□□□□□ -1.83
SMOQ99835 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.65□□□□□ -1.83
SMOQ99835 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.65□□□□□ -1.83
SMOQ99835 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.65□□□□□ -1.83
SMOQ99835 MIR5692A1-201ENST00000580523 69 ntBASIC3.65□□□□□ -1.83
SMOQ99835 MIR548AC-201ENST00000585049 88 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC020914.4-201ENST00000597690 277 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC106900.2-201ENST00000604994 317 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC107294.1-201ENST00000609524 467 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC084781.2-201ENST00000615568 161 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC022149.2-201ENST00000621061 203 ntBASIC3.65□□□□□ -1.83
SMOQ99835 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.65□□□□□ -1.83
SMOQ99835 AC244205.2-202ENST00000635781 342 ntBASIC3.65□□□□□ -1.83
SMOQ99835 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMOQ99835 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMOQ99835 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.65□□□□□ -1.83
SMOQ99835 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.65□□□□□ -1.83
SMOQ99835 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMOQ99835 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SMOQ99835 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMOQ99835 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMOQ99835 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMOQ99835 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMOQ99835 CEP170P1-201ENST00000502249 4587 ntBASIC3.64□□□□□ -1.83
SMOQ99835 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMOQ99835 AL356274.2-201ENST00000624379 3752 ntBASIC3.64□□□□□ -1.83
SMOQ99835 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.64□□□□□ -1.83
SMOQ99835 Y_RNA.132-201ENST00000363421 102 ntBASIC3.64□□□□□ -1.83
SMOQ99835 RNU6-525P-201ENST00000363685 104 ntBASIC3.64□□□□□ -1.83
SMOQ99835 RNU6-266P-201ENST00000364225 107 ntBASIC3.64□□□□□ -1.83
SMOQ99835 RNU1-33P-201ENST00000364249 162 ntBASIC3.64□□□□□ -1.83
SMOQ99835 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMOQ99835 RNU6-43P-201ENST00000384302 107 ntBASIC3.64□□□□□ -1.83
SMOQ99835 RNA5SP44-201ENST00000410446 133 ntBASIC3.64□□□□□ -1.83
SMOQ99835 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.64□□□□□ -1.83
SMOQ99835 AL590632.1-201ENST00000424289 371 ntBASIC3.64□□□□□ -1.83
SMOQ99835 RPL7P37-201ENST00000425095 738 ntBASIC3.64□□□□□ -1.83
SMOQ99835 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.64□□□□□ -1.83
SMOQ99835 PRSS3P4-201ENST00000453323 162 ntBASIC3.64□□□□□ -1.83
SMOQ99835 RPL7P49-201ENST00000471402 708 ntBASIC3.64□□□□□ -1.83
SMOQ99835 AC022493.1-201ENST00000492984 337 ntBASIC3.64□□□□□ -1.83
SMOQ99835 AC005921.1-201ENST00000510589 286 ntBASIC3.64□□□□□ -1.83
SMOQ99835 RPL39P5-202ENST00000512505 151 ntBASIC3.64□□□□□ -1.83
SMOQ99835 AP003072.1-201ENST00000531740 145 ntBASIC3.64□□□□□ -1.83
SMOQ99835 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.64□□□□□ -1.83
SMOQ99835 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.64□□□□□ -1.83
SMOQ99835 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.64□□□□□ -1.83
SMOQ99835 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.64□□□□□ -1.83
SMOQ99835 AC093249.1-201ENST00000567049 203 ntBASIC3.64□□□□□ -1.83
SMOQ99835 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.64□□□□□ -1.83
SMOQ99835 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMOQ99835 AC007151.1-201ENST00000572774 483 ntBASIC3.64□□□□□ -1.83
SMOQ99835 MIR4738-201ENST00000579134 87 ntBASIC3.64□□□□□ -1.83
SMOQ99835 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.64□□□□□ -1.83
SMOQ99835 AC022432.1-201ENST00000595739 310 ntBASIC3.64□□□□□ -1.83
SMOQ99835 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
SMOQ99835 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms