Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.28□□□□□ -2.36
SPENQ96T58 RNU6-1218P-201ENST00000458990 108 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 snoU13.11-201ENST00000459219 104 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 AC087477.1-201ENST00000465747 340 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SPENQ96T58 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
SPENQ96T58 AC022690.1-201ENST00000526681 550 ntBASIC0.28□□□□□ -2.36
SPENQ96T58 AC010099.3-201ENST00000423896 409 ntBASIC0.28□□□□□ -2.37
SPENQ96T58 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.28□□□□□ -2.37
SPENQ96T58 Y_RNA.644-201ENST00000459006 113 ntBASIC0.28□□□□□ -2.37
SPENQ96T58 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.28□□□□□ -2.37
SPENQ96T58 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.28□□□□□ -2.37
SPENQ96T58 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.28□□□□□ -2.37
SPENQ96T58 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.28□□□□□ -2.37
SPENQ96T58 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.28□□□□□ -2.37
SPENQ96T58 Y_RNA.185-201ENST00000363894 100 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 U8.7-201ENST00000364940 136 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 RNA5SP252-201ENST00000391131 119 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 NDUFB4P7-201ENST00000423198 363 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 MTCO1P53-201ENST00000441633 699 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 RNU6-362P-201ENST00000516736 90 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AC118273.2-201ENST00000532092 465 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.27□□□□□ -2.37
SPENQ96T58 AP001269.3-201ENST00000588718 329 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AC243960.4-201ENST00000600532 288 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 CLIC4P2-201ENST00000601934 717 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AC040174.2-201ENST00000602701 465 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AL161629.2-201ENST00000615347 275 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.27□□□□□ -2.37
SPENQ96T58 AC012676.2-201ENST00000619258 186 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
SPENQ96T58 MIR198-201ENST00000637333 62 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 MIR767-201ENST00000390228 109 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AC245047.4-201ENST00000433189 144 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SPENQ96T58 snoU109.1-201ENST00000459339 135 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 CYCTP-201ENST00000504253 315 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.27□□□□□ -2.37
SPENQ96T58 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.27□□□□□ -2.37
SPENQ96T58 RNU1-124P-201ENST00000363861 145 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.27□□□□□ -2.37
SPENQ96T58 RNU6-272P-201ENST00000411028 104 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AL606490.4-201ENST00000423117 127 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AC098614.2-201ENST00000426040 255 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AC138853.1-201ENST00000503549 823 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.27□□□□□ -2.37
SPENQ96T58 MTCO2P22-201ENST00000603246 681 ntBASIC0.27□□□□□ -2.37
SPENQ96T58 Y_RNA.25-201ENST00000362528 102 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 RPL21P66-201ENST00000426566 466 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 AC092393.1-201ENST00000439625 742 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 AL355816.1-201ENST00000607951 118 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 AC121333.1-201ENST00000567488 2709 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 MTCO3P4-201ENST00000419236 787 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.26□□□□□ -2.37
SPENQ96T58 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.26□□□□□ -2.37
SPENQ96T58 ANKRD26P4-201ENST00000455755 950 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.26□□□□□ -2.37
SPENQ96T58 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.26□□□□□ -2.37
SPENQ96T58 AGGF1P5-201ENST00000567900 919 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.26□□□□□ -2.37
SPENQ96T58 U3.8-201ENST00000363675 217 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 RNU4-7P-201ENST00000364758 141 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 RPS3AP24-201ENST00000407896 734 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 AC097499.1-201ENST00000444277 208 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 AC087588.1-201ENST00000462203 316 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.26□□□□□ -2.37
SPENQ96T58 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.26□□□□□ -2.37
SPENQ96T58 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.26□□□□□ -2.37
SPENQ96T58 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.26□□□□□ -2.37
SPENQ96T58 AL669831.4-202ENST00000590817 238 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 FAM60CP-201ENST00000591086 664 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.26□□□□□ -2.37
SPENQ96T58 AL356585.4-201ENST00000623078 1229 ntBASIC0.26□□□□□ -2.37
SPENQ96T58 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
SPENQ96T58 HSPE1P21-201ENST00000438283 308 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 RNU7-26P-201ENST00000458980 63 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 AL138726.1-201ENST00000614873 333 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 AC097372.5-201ENST00000623665 376 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.25□□□□□ -2.37
SPENQ96T58 SNX3P1X-201ENST00000414887 175 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.25□□□□□ -2.37
SPENQ96T58 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.25□□□□□ -2.37
SPENQ96T58 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.25□□□□□ -2.37
SPENQ96T58 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.25□□□□□ -2.37
SPENQ96T58 MIR4299-201ENST00000577899 72 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 Pinc.1-201ENST00000616452 154 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 AC087821.2-201ENST00000637086 450 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.25□□□□□ -2.37
SPENQ96T58 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SPENQ96T58 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
SPENQ96T58 AC108157.1-201ENST00000510511 539 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 RNU6-1073P-201ENST00000517182 106 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 SNORD14A-201ENST00000606526 91 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 AL590282.1-201ENST00000610379 1136 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 AC084824.5-201ENST00000612009 413 ntBASIC0.25□□□□□ -2.37
SPENQ96T58 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.25□□□□□ -2.37
SPENQ96T58 RNU6-45P-201ENST00000384471 107 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 AL606495.1-201ENST00000422100 813 ntBASIC0.24□□□□□ -2.37
SPENQ96T58 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms