Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC087190.1-201ENST00000484462 480 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC093591.1-201ENST00000491435 481 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RPL21P129-201ENST00000491732 478 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RPL21P16-201ENST00000495531 483 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RNU6-1281P-201ENST00000516223 105 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AL157687.1-201ENST00000554853 619 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC136619.2-201ENST00000563361 631 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 CYCSP39-201ENST00000565821 309 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC234778.2-201ENST00000566241 354 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC023043.3-201ENST00000593113 385 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 U3.45-201ENST00000607547 219 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC068137.3-201ENST00000639191 341 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC073869.6-201ENST00000640656 341 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC009487.2-201ENST00000420969 6821 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 SNORA70.2-201ENST00000364506 135 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 RNU6-750P-201ENST00000390946 107 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 USP9YP27-201ENST00000418455 438 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AL645937.1-202ENST00000421799 937 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AL358075.3-201ENST00000426289 226 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 SEPT14P3-201ENST00000439401 183 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AL732372.2-207ENST00000445840 183 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AL360271.2-201ENST00000447710 161 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 NDUFB1P2-201ENST00000449477 176 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 SEPT14P2-201ENST00000453405 183 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC233279.1-201ENST00000455300 423 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 SCARNA18-201ENST00000459004 134 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 RN7SL385P-201ENST00000468873 276 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 RPL23AP11-201ENST00000475260 469 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC079140.5-201ENST00000507882 310 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC074344.1-201ENST00000512823 224 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 SEPT14P4-201ENST00000513445 186 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 Y_RNA.704-201ENST00000516851 102 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 SNORD19.2-201ENST00000516978 73 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 FO082796.1-201ENST00000523795 183 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 MTND4P7-201ENST00000523876 130 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AL121821.2-201ENST00000556081 394 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 MIR5685-201ENST00000579080 79 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC015917.1-201ENST00000579654 510 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 MIR4697-201ENST00000582977 78 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AC008739.2-201ENST00000597006 317 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 MIR6810-201ENST00000622701 70 ntBASIC3.04□□□□□ -1.92
NR1H4Q96RI1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.04□□□□□ -1.92
NR1H4Q96RI1 AL355596.1-201ENST00000565399 3996 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC004944.1-201ENST00000517807 3059 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 SNORA75B-201ENST00000384053 137 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 Y_RNA.505-201ENST00000384489 102 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 MIR10A-201ENST00000385043 110 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 SNORD70.1-201ENST00000391007 85 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 RNA5SP492-201ENST00000411330 114 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 ATG3P1-201ENST00000419507 911 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC009414.1-201ENST00000427200 443 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AL133162.1-201ENST00000463228 453 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 RNA5SP401-201ENST00000515920 127 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 MIR892C-201ENST00000516410 77 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 OR5AQ1P-201ENST00000527596 927 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC006199.1-201ENST00000548728 219 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 BNIP3P6-201ENST00000549284 499 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 TPRKBP2-201ENST00000565969 475 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC007151.1-201ENST00000572774 483 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 RN7SL703P-201ENST00000578485 302 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 MIR5187-201ENST00000583479 76 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.03□□□□□ -1.92
NR1H4Q96RI1 BNIP3P30-201ENST00000601184 574 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC025165.5-201ENST00000602802 578 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 AC087045.1-201ENST00000605856 382 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 Z82243.1-201ENST00000609432 473 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 uc_338.34-201ENST00000617467 174 ntBASIC3.03□□□□□ -1.92
NR1H4Q96RI1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms