Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RPL21P40-201ENST00000428586 483 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 RPL21P23-201ENST00000446654 460 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 RPL21P10-201ENST00000463521 490 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RPL23AP11-201ENST00000475260 469 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 HMGN2P13-201ENST00000476476 274 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 TRBV1-201ENST00000476502 284 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 BTF3L4P4-201ENST00000506381 449 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC074250.1-201ENST00000511117 192 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RN7SKP24-201ENST00000515888 284 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RNU6-256P-201ENST00000516747 97 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RN7SKP209-201ENST00000516888 304 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 AP005639.2-201ENST00000527592 928 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC093012.1-202ENST00000549403 582 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 MIR3171-201ENST00000584270 74 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC006116.10-201ENST00000591836 581 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC007179.3-201ENST00000604976 235 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC124303.1-201ENST00000605703 360 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 MIR1302-2-201ENST00000607096 138 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 Y_RNA.812-201ENST00000610788 101 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 Y_RNA.784-201ENST00000613803 101 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC040896.1-201ENST00000613819 479 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 FAM157A-202ENST00000615155 405 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 Y_RNA.787-201ENST00000616522 101 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 Y_RNA.780-201ENST00000617336 101 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 Y_RNA.801-201ENST00000619005 101 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 AC244205.2-202ENST00000635781 342 ntBASIC2.78□□□□□ -1.96
DUX3Q96PT4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DUX3Q96PT4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.78□□□□□ -1.96
DUX3Q96PT4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DUX3Q96PT4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC138393.1-203ENST00000327086 343 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 RNA5SP50-201ENST00000363731 107 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 SNORA36C-201ENST00000384289 132 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AL590004.1-201ENST00000405321 300 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 RNU6-370P-201ENST00000411008 104 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 VN1R36P-201ENST00000414936 291 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC245054.2-201ENST00000415639 319 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 SKA2P1-201ENST00000425592 390 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 MTCO1P39-201ENST00000426148 480 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 RPL32P28-201ENST00000443577 397 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC091179.1-201ENST00000461606 579 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AL049874.1-201ENST00000489560 388 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC092185.1-201ENST00000491371 97 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 RNU2-69P-201ENST00000516061 100 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 RNU1-61P-201ENST00000516107 151 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 RN7SKP83-201ENST00000516512 178 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 SNORA25.17-201ENST00000517184 124 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AP004371.1-201ENST00000525240 214 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 RANP3-201ENST00000530970 276 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AP000889.2-201ENST00000532684 490 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 MIR4790-201ENST00000577799 79 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 AL161756.2-201ENST00000604597 246 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 SDR42E1P2-201ENST00000614861 481 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 AL355365.1-201ENST00000616480 294 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 MIR6130-201ENST00000619419 109 ntBASIC2.77□□□□□ -1.97
DUX3Q96PT4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
DUX3Q96PT4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.77□□□□□ -1.97
DUX3Q96PT4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
DUX3Q96PT4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
DUX3Q96PT4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.76□□□□□ -1.97
DUX3Q96PT4 AC073073.2-201ENST00000609827 2578 ntBASIC2.76□□□□□ -1.97
DUX3Q96PT4 AC103710.2-202ENST00000641454 2853 ntBASIC2.76□□□□□ -1.97
DUX3Q96PT4 PWAR6-201ENST00000552334 4618 ntBASIC2.76□□□□□ -1.97
DUX3Q96PT4 AL365440.1-201ENST00000436135 2167 ntBASIC2.76□□□□□ -1.97
DUX3Q96PT4 RNU1-18P-201ENST00000363062 164 ntBASIC2.76□□□□□ -1.97
DUX3Q96PT4 Y_RNA.212-201ENST00000364177 102 ntBASIC2.76□□□□□ -1.97
DUX3Q96PT4 SNORA4.3-201ENST00000365564 137 ntBASIC2.76□□□□□ -1.97
DUX3Q96PT4 SNORD42.2-201ENST00000365570 69 ntBASIC2.76□□□□□ -1.97
DUX3Q96PT4 DEFB109C-201ENST00000382575 264 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms