Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AP001880.2-201ENST00000538233 448 ntBASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 AL121603.1-201ENST00000553815 142 ntBASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 AL157871.3-201ENST00000557231 293 ntBASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 MIR1273C-201ENST00000578669 77 ntBASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3BQ96NU0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 AL353796.1-201ENST00000561542 3241 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-1272P-201ENST00000362776 107 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-381P-201ENST00000391259 108 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 AL592045.1-201ENST00000429867 352 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 AL358472.1-201ENST00000431295 329 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 PHBP16-201ENST00000446318 950 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 RN7SL319P-201ENST00000480656 221 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-513P-201ENST00000516104 104 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 AC093591.2-201ENST00000565254 3843 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 PCAT14-202ENST00000627127 3935 ntBASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CNTNAP3BQ96NU0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 RNA5SP509-201ENST00000364577 119 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 SNORA70F-201ENST00000384142 135 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 MIR634-201ENST00000385208 97 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-578P-201ENST00000390980 103 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 RNY4P30-201ENST00000410216 95 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AL158823.1-201ENST00000418441 478 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AC007161.1-204ENST00000423039 460 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 RPS15AP5-201ENST00000436276 388 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 Z82210.1-201ENST00000440037 231 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AC009296.1-201ENST00000443146 155 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 HSPE1P6-201ENST00000479457 291 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AK3P2-201ENST00000507976 429 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 SNORA31.9-201ENST00000516429 84 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AP003327.1-201ENST00000529684 127 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AL353748.2-201ENST00000622148 471 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 SCARNA4-201ENST00000629045 128 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 MIR3914-2-201ENST00000637339 95 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AC009812.4-201ENST00000569134 1805 ntBASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CNTNAP3BQ96NU0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 AL139811.1-201ENST00000424779 2299 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 RNU5A-1-201ENST00000362698 116 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 RNU4-80P-201ENST00000363200 141 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-173P-201ENST00000364215 104 ntBASIC4.87□□□□□ -1.63
CNTNAP3BQ96NU0 SNORA9-201ENST00000384215 133 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms