Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC010338.1-201ENST00000621823 717 ntBASIC3.66□□□□□ -1.82
SNX27Q96L92 AC090740.1-201ENST00000623193 2262 ntBASIC3.66□□□□□ -1.82
SNX27Q96L92 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX27Q96L92 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX27Q96L92 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
SNX27Q96L92 AL513302.2-201ENST00000562313 1842 ntBASIC3.65□□□□□ -1.82
SNX27Q96L92 MTND4P14-201ENST00000435799 1354 ntBASIC3.65□□□□□ -1.82
SNX27Q96L92 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SNX27Q96L92 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SNX27Q96L92 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SNX27Q96L92 NACAP2-201ENST00000318548 624 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 RPL7P26-201ENST00000333817 754 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 RNY3P3-201ENST00000363816 102 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 Y_RNA.245-201ENST00000364493 95 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 RNU6-550P-201ENST00000391057 101 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX27Q96L92 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX27Q96L92 AL139281.1-201ENST00000422120 335 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 TMEM167AP1-201ENST00000423409 219 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX27Q96L92 NEK4P1-201ENST00000433383 879 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 DPPA3P1-201ENST00000448050 469 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX27Q96L92 RPS4XP2-201ENST00000458402 793 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 AC128713.1-201ENST00000471495 306 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.65□□□□□ -1.83
SNX27Q96L92 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX27Q96L92 RNA5SP458-201ENST00000516188 119 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 RNA5SP290-201ENST00000517133 127 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.65□□□□□ -1.83
SNX27Q96L92 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX27Q96L92 HIF1AP1-201ENST00000553642 175 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 TRAV28-201ENST00000557548 323 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 DISC2.1-201ENST00000612827 205 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.65□□□□□ -1.83
SNX27Q96L92 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.65□□□□□ -1.83
SNX27Q96L92 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX27Q96L92 AL354685.2-201ENST00000448218 1447 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNX27Q96L92 AC007496.3-201ENST00000624987 3443 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 TPTE2P4-201ENST00000258589 1605 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 AL139276.1-201ENST00000311910 1001 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 AL354719.1-201ENST00000406535 843 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 AC080125.1-201ENST00000414888 684 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX27Q96L92 AL592045.1-201ENST00000429867 352 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 AC006028.1-201ENST00000438379 402 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX27Q96L92 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX27Q96L92 RNA5SP310-201ENST00000459084 116 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 snoU13.15-201ENST00000459407 104 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 RPL31P58-201ENST00000469001 379 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 AC069439.1-201ENST00000494739 167 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX27Q96L92 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX27Q96L92 RNU6-914P-201ENST00000516749 109 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 RNU6-143P-201ENST00000516942 93 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX27Q96L92 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX27Q96L92 MIR15A-201ENST00000607334 83 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX27Q96L92 MIR3662-201ENST00000637030 95 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SNX27Q96L92 Z83843.1-201ENST00000604070 3685 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNX27Q96L92 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SNX27Q96L92 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX27Q96L92 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX27Q96L92 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX27Q96L92 ZNF72P-201ENST00000425869 1908 ntBASIC3.64□□□□□ -1.83
SNX27Q96L92 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX27Q96L92 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX27Q96L92 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX27Q96L92 RNU6-451P-201ENST00000362921 107 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 Y_RNA.338-201ENST00000365320 114 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SNX27Q96L92 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX27Q96L92 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
SNX27Q96L92 OR9R1P-201ENST00000412200 877 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 USP9YP6-201ENST00000413550 854 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX27Q96L92 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX27Q96L92 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX27Q96L92 AL512844.2-201ENST00000433990 593 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 Z82210.1-201ENST00000440037 231 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX27Q96L92 SNRPFP3-201ENST00000457792 225 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 RPS15AP34-201ENST00000487776 387 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 AC092185.1-201ENST00000491371 97 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 EIF4EP3-201ENST00000498782 656 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX27Q96L92 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX27Q96L92 SUB1P1-201ENST00000524415 382 ntBASIC3.63□□□□□ -1.83
SNX27Q96L92 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX27Q96L92 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX27Q96L92 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX27Q96L92 AL138889.2-201ENST00000603883 242 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms