Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AL591034.2-201ENST00000402839 359 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 RPL23AP48-201ENST00000406913 488 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 SNORA57.3-201ENST00000411095 141 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 HSPE1P12-201ENST00000412576 301 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.28□□□□□ -1.72
SHDQ96IW2 AC087650.1-201ENST00000431445 468 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.28□□□□□ -1.72
SHDQ96IW2 BTF3P15-201ENST00000455606 336 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 RPL9P32-201ENST00000464118 620 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 AC128713.1-201ENST00000471495 306 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 RN7SKP46-201ENST00000515942 234 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 RNU6-1183P-201ENST00000517054 60 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.28□□□□□ -1.72
SHDQ96IW2 AC011602.1-201ENST00000546484 331 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 SUB1P3-201ENST00000564581 315 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.28□□□□□ -1.72
SHDQ96IW2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHDQ96IW2 AL158196.1-201ENST00000616786 434 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 AC007546.2-201ENST00000623996 360 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHDQ96IW2 Z82217.1-201ENST00000625157 8149 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 AC087190.4-201ENST00000574616 8334 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHDQ96IW2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.28□□□□□ -1.72
SHDQ96IW2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHDQ96IW2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.28□□□□□ -1.72
SHDQ96IW2 MAPK10-303ENST00000641324 3959 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SHDQ96IW2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHDQ96IW2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.27□□□□□ -1.73
SHDQ96IW2 ZNF807-201ENST00000328088 1707 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.27□□□□□ -1.73
SHDQ96IW2 RNY1P14-201ENST00000384426 108 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHDQ96IW2 MIR921-201ENST00000401133 56 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 U3.37-201ENST00000408528 213 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.27□□□□□ -1.73
SHDQ96IW2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.27□□□□□ -1.73
SHDQ96IW2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.27□□□□□ -1.73
SHDQ96IW2 BX276092.3-201ENST00000424182 230 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 AL691449.1-201ENST00000426570 421 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.27□□□□□ -1.73
SHDQ96IW2 MTND3P2-201ENST00000438452 342 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 RPS3AP12-201ENST00000443616 753 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 HIGD1AP2-201ENST00000446367 280 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.27□□□□□ -1.73
SHDQ96IW2 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 HMGN2P16-201ENST00000456802 261 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 snoU109.2-201ENST00000459316 135 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 AF213884.1-201ENST00000488102 463 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 RPL17P19-201ENST00000489069 552 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 FTH1P9-201ENST00000513251 355 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 AP000889.1-201ENST00000530968 660 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 GNAI2P1-201ENST00000541815 315 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 AC103996.1-201ENST00000555468 102 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.27□□□□□ -1.73
SHDQ96IW2 AL161756.2-201ENST00000604597 246 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 MIR8076-201ENST00000611401 83 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.27□□□□□ -1.73
SHDQ96IW2 AC004825.2-201ENST00000616634 455 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 AC007485.1-201ENST00000616755 206 ntBASIC4.27□□□□□ -1.73
SHDQ96IW2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHDQ96IW2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHDQ96IW2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHDQ96IW2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SHDQ96IW2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.27□□□□□ -1.73
SHDQ96IW2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHDQ96IW2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SHDQ96IW2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SHDQ96IW2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHDQ96IW2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHDQ96IW2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.26□□□□□ -1.73
SHDQ96IW2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHDQ96IW2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.26□□□□□ -1.73
SHDQ96IW2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.26□□□□□ -1.73
SHDQ96IW2 SNORA60-201ENST00000362396 134 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 Y_RNA.80-201ENST00000362996 102 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 RNU1-73P-201ENST00000383971 164 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 RNU6-1035P-201ENST00000384477 107 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 SNORA1.3-201ENST00000384676 136 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.26□□□□□ -1.73
SHDQ96IW2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.26□□□□□ -1.73
SHDQ96IW2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.26□□□□□ -1.73
SHDQ96IW2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.26□□□□□ -1.73
SHDQ96IW2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.26□□□□□ -1.73
SHDQ96IW2 AC243428.1-201ENST00000421099 264 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 Z74021.1-201ENST00000423610 407 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 AL358472.1-201ENST00000431295 329 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 AL160004.2-201ENST00000432935 350 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHDQ96IW2 AC013470.1-201ENST00000453438 462 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
SHDQ96IW2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.26□□□□□ -1.73
SHDQ96IW2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.26□□□□□ -1.73
SHDQ96IW2 AC116655.1-201ENST00000508324 901 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 AP005902.1-201ENST00000521358 186 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 AP004607.1-201ENST00000524456 203 ntBASIC4.26□□□□□ -1.73
SHDQ96IW2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms