Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 HIGD1AP13-201ENST00000509878 289 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 OR5B19P-201ENST00000531766 928 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VMP1Q96GC9 AL158032.1-201ENST00000605401 106 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC087045.1-201ENST00000605856 382 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC138749.5-201ENST00000611461 208 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC004223.4-201ENST00000612426 332 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC116165.2-201ENST00000616705 206 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VMP1Q96GC9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 OR5J1P-201ENST00000313544 939 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 OR56A5-201ENST00000340110 738 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 RNU4-1-201ENST00000363925 141 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 MIR512-1-201ENST00000384913 84 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 MIR634-201ENST00000385208 97 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 AL133475.1-201ENST00000404414 305 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 AL589872.1-201ENST00000426602 288 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 MYL8P-204ENST00000431574 518 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC087499.2-201ENST00000432861 149 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 RPL7P34-201ENST00000433316 712 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 USP9YP12-201ENST00000450481 570 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC090515.1-201ENST00000465295 476 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC090136.1-201ENST00000520009 240 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VMP1Q96GC9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 MTND1P24-201ENST00000552175 861 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC234778.2-201ENST00000566241 354 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 ELOCP29-201ENST00000588193 334 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC068276.1-201ENST00000605793 379 ntBASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.64□□□□□ -1.99
VMP1Q96GC9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VMP1Q96GC9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 SNORA18.3-201ENST00000384122 132 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC105272.1-201ENST00000438604 198 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 USP9YP15-201ENST00000442391 422 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC068781.1-201ENST00000488231 618 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 SNORA9.3-201ENST00000516383 129 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC022878.1-201ENST00000530684 149 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 ADI1P3-201ENST00000549509 470 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AL138976.2-201ENST00000563989 694 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.63□□□□□ -1.99
VMP1Q96GC9 AC009233.1-201ENST00000616477 371 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 U4atac.1-201ENST00000618345 95 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.63□□□□□ -1.99
VMP1Q96GC9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VMP1Q96GC9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VMP1Q96GC9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VMP1Q96GC9 RNA5SP240-201ENST00000365355 128 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 FTH1P15-201ENST00000406984 280 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 ELOCP4-201ENST00000420090 333 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC007283.2-201ENST00000424739 197 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC016691.1-201ENST00000441321 413 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.62□□□□□ -1.99
VMP1Q96GC9 AL583843.1-201ENST00000456070 346 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 CYP2C59P-201ENST00000457790 269 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 AP001486.1-201ENST00000463339 476 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 RNU6-1129P-201ENST00000515964 104 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 FAM92A1P1-201ENST00000528023 890 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 HPRT1P3-201ENST00000539521 576 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC009094.1-201ENST00000564443 426 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC092325.1-201ENST00000566449 554 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 RPS3AP23-202ENST00000574601 686 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC090616.2-202ENST00000584248 222 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 AF131215.7-201ENST00000602443 707 ntBASIC2.62□□□□□ -1.99
VMP1Q96GC9 AC112191.3-201ENST00000604371 277 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms