Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
DDX11Q96FC9 Y_RNA.364-201ENST00000365532 101 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
DDX11Q96FC9 Y_RNA.404-201ENST00000383978 102 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.4□□□□□ -1.71
DDX11Q96FC9 HMGB1P12-201ENST00000438594 598 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.4□□□□□ -1.71
DDX11Q96FC9 AP001086.1-201ENST00000494882 321 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 FTH1P9-201ENST00000513251 355 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.4□□□□□ -1.71
DDX11Q96FC9 AL670379.6-201ENST00000603753 252 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AC008162.1-201ENST00000604718 254 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AL670379.1-201ENST00000604752 252 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AL670379.5-201ENST00000605253 252 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AL670379.8-201ENST00000605353 252 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AC007619.2-201ENST00000605743 379 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 AL670379.7-201ENST00000605823 252 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 SNORA62.6-201ENST00000606322 83 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 SNHG22-203ENST00000617833 660 ntBASIC4.4□□□□□ -1.71
DDX11Q96FC9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
DDX11Q96FC9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.4□□□□□ -1.71
DDX11Q96FC9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
DDX11Q96FC9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
DDX11Q96FC9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
DDX11Q96FC9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX11Q96FC9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX11Q96FC9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
DDX11Q96FC9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DDX11Q96FC9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DDX11Q96FC9 Y_RNA.80-201ENST00000362996 102 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 Y_RNA.176-201ENST00000363815 109 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 Y_RNA.188-201ENST00000363952 111 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 SNORA7.2-201ENST00000364446 145 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 Y_RNA.496-201ENST00000384444 101 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
DDX11Q96FC9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
DDX11Q96FC9 SNORA75.6-201ENST00000391318 127 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
DDX11Q96FC9 NDUFS5P1-201ENST00000405668 289 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 RNU4-65P-201ENST00000410473 140 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.39□□□□□ -1.71
DDX11Q96FC9 RPS29P4-201ENST00000414733 161 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 RPLP0P7-201ENST00000416050 667 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 SYF2P2-201ENST00000417620 583 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 HMGN2P31-201ENST00000432430 273 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 MTCO3P45-201ENST00000443036 613 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 PRSS3P4-201ENST00000453323 162 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 AC128713.1-201ENST00000471495 306 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 RPL23AP55-201ENST00000498163 452 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DDX11Q96FC9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.39□□□□□ -1.71
DDX11Q96FC9 AC026782.1-201ENST00000512952 449 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 RNU2-69P-201ENST00000516061 100 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 RNU6-120P-201ENST00000516077 103 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 SNORA14.1-201ENST00000516113 141 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 RNU6-264P-201ENST00000517134 104 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 AP004371.1-201ENST00000525240 214 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 AC023442.1-201ENST00000531247 422 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.39□□□□□ -1.71
DDX11Q96FC9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.39□□□□□ -1.71
DDX11Q96FC9 MIR3941-201ENST00000582572 103 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 MIR5187-201ENST00000583479 76 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 SRGNP1-201ENST00000603392 451 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 NUTF2P8-201ENST00000604593 363 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 AL670379.4-201ENST00000605279 254 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 AC011890.2-201ENST00000613393 294 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 AC092608.2-201ENST00000624427 218 ntBASIC4.39□□□□□ -1.71
DDX11Q96FC9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DDX11Q96FC9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX11Q96FC9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX11Q96FC9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC007685.1-201ENST00000329806 452 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 RNU6-715P-201ENST00000365204 103 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX11Q96FC9 RNU6-128P-201ENST00000383976 107 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX11Q96FC9 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX11Q96FC9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 SSXP9-201ENST00000417503 292 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 RPL21P109-201ENST00000422213 475 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 RPL23AP69-201ENST00000431134 458 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 MRPS18BP2-201ENST00000434310 759 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 HSPD1P21-201ENST00000436541 245 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 RNU7-167P-201ENST00000459160 62 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC015911.1-201ENST00000495111 156 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC104619.4-201ENST00000510773 249 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 Y_RNA.670-201ENST00000516255 105 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 RNU2-58P-201ENST00000516403 183 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 Y_RNA.708-201ENST00000516950 96 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 HMGN1P28-201ENST00000521340 364 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 AP006587.4-201ENST00000526053 529 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms