Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 SNORD116-2-201ENST00000384274 95 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 SNORD116-6-201ENST00000384711 96 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 CISD1P1-201ENST00000393907 327 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AL513475.1-201ENST00000406602 315 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 MIR1302-8-201ENST00000408342 128 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 OR2B8P-201ENST00000432841 938 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AL445687.1-201ENST00000439946 251 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 GAPDHP17-201ENST00000449858 1001 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 SNORD42A-201ENST00000459584 64 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 RAP1BP2-201ENST00000478270 544 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 RNU6-123P-201ENST00000516163 102 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AC009902.1-201ENST00000519351 183 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 BTF3P12-201ENST00000519620 469 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 HSPE1P20-201ENST00000538133 289 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AC090616.3-201ENST00000582184 217 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 MIR3616-201ENST00000584070 92 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AC010620.1-201ENST00000601088 1102 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AC090578.1-201ENST00000604955 591 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AC007938.3-201ENST00000604965 623 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AL158063.1-201ENST00000615349 536 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 U6.42-201ENST00000618440 107 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 CU459211.1-201ENST00000635667 749 ntBASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SNRNP40Q96DI7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 MTND5P30-201ENST00000452896 1731 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC010329.5-201ENST00000623497 2174 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 MAPK10-266ENST00000641066 6555 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 Y_RNA.77-201ENST00000362962 107 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 SNORA24.1-201ENST00000384401 135 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 RN7SKP142-201ENST00000411236 328 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 ARL5AP4-201ENST00000430731 512 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 MYL8P-204ENST00000431574 518 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 EIF4EP3-201ENST00000498782 656 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 RNU4-29P-201ENST00000515943 174 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 RNU6-410P-201ENST00000517006 107 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 RANP3-201ENST00000530970 276 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 OR5BN1P-201ENST00000532955 829 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 MIR4765-201ENST00000585007 77 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC098848.2-201ENST00000588023 330 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC091152.3-201ENST00000604227 325 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AL670379.4-201ENST00000605279 254 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AC126118.1-201ENST00000607744 628 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 AL589743.7-201ENST00000612637 233 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 Z69908.1-201ENST00000622603 247 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 U6.114-201ENST00000636407 96 ntBASIC2.59□□□□□ -1.99
SNRNP40Q96DI7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.59□□□□□ -2
SNRNP40Q96DI7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SNRNP40Q96DI7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SNRNP40Q96DI7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.58□□□□□ -2
SNRNP40Q96DI7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SNRNP40Q96DI7 RNU6-898P-201ENST00000365627 104 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 SNORD116-1-201ENST00000384335 95 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 MIR34A-201ENST00000385130 110 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 MIR887-201ENST00000401258 79 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 OR51A5P-201ENST00000415429 942 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.58□□□□□ -2
SNRNP40Q96DI7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.58□□□□□ -2
SNRNP40Q96DI7 AL121890.1-201ENST00000435457 205 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.58□□□□□ -2
SNRNP40Q96DI7 RPL21P2-201ENST00000440049 481 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.58□□□□□ -2
SNRNP40Q96DI7 AC079781.2-201ENST00000446424 169 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 AC009961.3-201ENST00000449832 765 ntBASIC2.58□□□□□ -2
SNRNP40Q96DI7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms