Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 Y_RNA.231-201ENST00000364358 102 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 RNU6-1127P-201ENST00000384580 107 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 MIR23A-201ENST00000385245 73 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 RNA5SP120-201ENST00000410900 112 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AC245291.1-201ENST00000419501 328 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AL139413.1-201ENST00000421309 217 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AC005326.1-201ENST00000429197 123 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 BX679664.1-201ENST00000434429 253 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 RPS3AP12-201ENST00000443616 753 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AC093663.1-201ENST00000497190 394 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AC104136.1-201ENST00000512969 394 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 MIR5583-1-201ENST00000580941 59 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 MIR4424-201ENST00000585257 86 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 DUSP12P1-201ENST00000612874 516 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 AC110774.1-201ENST00000623567 2018 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 MTND4P35-201ENST00000604257 1375 ntBASIC3.98□□□□□ -1.77
CHMP4CQ96CF2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 RNU4-20P-201ENST00000365601 151 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 RNU6-393P-201ENST00000384475 107 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 SNORD70.1-201ENST00000391007 85 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 RNA5SP38-201ENST00000410750 119 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 RPL21P90-201ENST00000415692 466 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 ARL5AP1-201ENST00000418991 388 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 HMGB1P31-201ENST00000437242 427 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 HMGN2P20-201ENST00000437531 273 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 AL121601.2-201ENST00000438019 707 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 RPS29P25-201ENST00000481709 171 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 RNU6-358P-201ENST00000516564 75 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 MIR4276-201ENST00000584832 70 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 MIR3651-201ENST00000630427 90 ntBASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4CQ96CF2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 RNU6-38P-201ENST00000384085 107 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 RNU6-434P-201ENST00000384376 107 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 HMGN2P30-201ENST00000423237 256 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 ERLEC1P1-201ENST00000433806 578 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 MTCO3P18-201ENST00000440206 761 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 RPS15AP27-201ENST00000449183 343 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 RNU6-333P-201ENST00000459117 107 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 AC116353.2-201ENST00000505332 712 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 MTCO3P9-201ENST00000506989 781 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 MIR2276-201ENST00000516886 89 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 AC060780.3-201ENST00000589464 80 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 MIR7112-201ENST00000616126 65 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 AL138880.2-201ENST00000616214 239 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 U6.42-201ENST00000618440 107 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 AC009033.1-201ENST00000624279 431 ntBASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.96□□□□□ -1.78
CHMP4CQ96CF2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 Y_RNA.157-201ENST00000363638 102 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 SNORA9-201ENST00000384215 133 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 RNU6-45P-201ENST00000384471 107 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 MIR514A2-201ENST00000385131 88 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 MIR514A3-201ENST00000385132 88 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 RPL23AP83-201ENST00000434984 473 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AC115115.1-201ENST00000449927 248 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 AC139453.3-201ENST00000493276 369 ntBASIC3.95□□□□□ -1.78
CHMP4CQ96CF2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms