Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AL121769.1-201ENST00000469473 401 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 MTND4P2-201ENST00000507767 1203 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 RBBP4P6-201ENST00000508098 202 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC112206.3-201ENST00000514578 389 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC008885.1-201ENST00000514930 301 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 SNORD27.1-201ENST00000516319 72 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 SCARNA3-201ENST00000517097 143 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AP000873.5-201ENST00000533906 236 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 ELOCP31-201ENST00000540463 467 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 MIR4765-201ENST00000585007 77 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC110760.3-201ENST00000598794 467 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC068790.2-201ENST00000602601 557 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC006566.1-201ENST00000608943 513 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC022079.1-201ENST00000621546 602 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC034229.5-201ENST00000624258 185 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 SNORA63.1-201ENST00000362493 131 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 RNU6-74P-201ENST00000384235 107 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 RNA5SP120-201ENST00000410900 112 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC104389.3-201ENST00000445629 235 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC022364.2-201ENST00000457963 554 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 RNU6-956P-201ENST00000458868 103 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AL672167.3-201ENST00000465951 960 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC080014.1-201ENST00000496877 1201 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC023141.11-201ENST00000508864 202 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC008716.1-201ENST00000511084 513 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 RNA5SP112-201ENST00000515937 99 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC107016.2-201ENST00000547968 190 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 MIR5004-201ENST00000579078 107 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 AC012493.2-201ENST00000595083 291 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.74□□□□□ -1.97
VPS33AQ96AX1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS33AQ96AX1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 CKAP2P1-201ENST00000555477 2049 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 SNORA71.3-201ENST00000362582 128 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 RNU6-486P-201ENST00000363116 107 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 RNA5SP267-201ENST00000364893 126 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 SNORD115-7-201ENST00000365306 82 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 MIR454-201ENST00000390180 115 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 U3.19-201ENST00000390893 196 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 RNA5SP111-201ENST00000411386 101 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 BX295541.1-201ENST00000417774 250 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 MTCO3P5-201ENST00000433620 714 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 FABP5P14-201ENST00000437273 393 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC004383.1-201ENST00000438135 289 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AL031667.1-201ENST00000440222 725 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 USP9YP29-201ENST00000445112 563 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC079448.1-201ENST00000449377 373 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC080013.2-201ENST00000460866 323 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AP001324.2-201ENST00000461163 319 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC103975.1-201ENST00000482506 483 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 RPL22P13-201ENST00000493291 347 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC091826.1-201ENST00000514065 313 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 SNORA9.3-201ENST00000516383 129 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC004486.1-201ENST00000546846 233 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC092325.1-201ENST00000566449 554 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC106782.4-201ENST00000568264 210 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 MIR3199-1-201ENST00000582434 88 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 DEFB131E-202ENST00000602581 683 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 RNU6-91P-201ENST00000607774 107 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC099842.1-201ENST00000619919 596 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 AC138627.2-201ENST00000624202 601 ntBASIC2.73□□□□□ -1.97
VPS33AQ96AX1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS33AQ96AX1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms