Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.13□□□□□ -1.75
ERCC4Q92889 HMGB1P27-201ENST00000431429 603 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC073063.1-201ENST00000434352 607 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 MRPS31P2-201ENST00000451581 518 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC084357.1-201ENST00000473404 255 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC090096.1-201ENST00000489168 390 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC026402.1-201ENST00000513642 170 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC093303.1-201ENST00000514549 295 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC007991.1-201ENST00000522680 631 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.13□□□□□ -1.75
ERCC4Q92889 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.13□□□□□ -1.75
ERCC4Q92889 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.13□□□□□ -1.75
ERCC4Q92889 MIR4425-201ENST00000580572 84 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC053481.4-201ENST00000583164 216 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC073539.2-201ENST00000597113 165 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AP001836.1-201ENST00000604675 523 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC116312.1-201ENST00000606841 314 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 MIR6875-201ENST00000617506 72 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.13□□□□□ -1.75
ERCC4Q92889 MIR7153-201ENST00000637758 57 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC116096.1-201ENST00000566804 2314 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.13□□□□□ -1.75
ERCC4Q92889 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC4Q92889 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC4Q92889 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC4Q92889 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
ERCC4Q92889 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.12□□□□□ -1.75
ERCC4Q92889 RNU5A-1-201ENST00000362698 116 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 RNA5SP42-201ENST00000364278 115 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 RNU1-64P-201ENST00000365443 163 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC4Q92889 MIR606-201ENST00000384851 96 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 SNORA57.3-201ENST00000411095 141 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 RNU6-1304P-201ENST00000411374 106 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.12□□□□□ -1.75
ERCC4Q92889 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 RPS24P13-201ENST00000442520 397 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AL137792.2-201ENST00000443484 235 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 AL360271.2-201ENST00000447710 161 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.12□□□□□ -1.75
ERCC4Q92889 AC130509.1-201ENST00000464158 433 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 RPL31P60-201ENST00000478450 367 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AL163540.1-201ENST00000485382 386 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 SUMO2P6-201ENST00000505273 288 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 MTCYBP40-201ENST00000509390 1135 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 AC022634.1-201ENST00000520765 532 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 SNRPGP16-201ENST00000533275 226 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AC106785.1-201ENST00000565935 262 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 AC087499.8-201ENST00000578406 226 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 MIR5690-201ENST00000583739 73 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AL355802.3-201ENST00000607571 545 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 uc_338.22-201ENST00000622722 187 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 AC244517.12-201ENST00000623581 663 ntBASIC4.12□□□□□ -1.75
ERCC4Q92889 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC4Q92889 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.12□□□□□ -1.75
ERCC4Q92889 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC4Q92889 AL353746.1-201ENST00000566293 6881 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 Y_RNA.112-201ENST00000363250 102 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 Y_RNA.146-201ENST00000363549 102 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 Y_RNA.202-201ENST00000364083 110 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 SNORA33.2-201ENST00000365413 134 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
ERCC4Q92889 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC4Q92889 Y_RNA.422-201ENST00000384054 114 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 Y_RNA.480-201ENST00000384364 102 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 RNU6-601P-201ENST00000384540 107 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 MIR578-201ENST00000384828 96 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ERCC4Q92889 RPS4XP7-201ENST00000406274 780 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC4Q92889 VDAC1P3-201ENST00000434069 851 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.11□□□□□ -1.75
ERCC4Q92889 SETP5-201ENST00000437270 562 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 TXNP1-201ENST00000441872 371 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 Y_RNA.653-201ENST00000459091 95 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 MLLT10P2-201ENST00000506434 249 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 AC026784.1-201ENST00000507986 352 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.11□□□□□ -1.75
ERCC4Q92889 NDUFB9P3-201ENST00000521269 501 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.11□□□□□ -1.75
ERCC4Q92889 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC4Q92889 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC4Q92889 AC100830.2-201ENST00000581636 240 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.11□□□□□ -1.75
ERCC4Q92889 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.11□□□□□ -1.75
ERCC4Q92889 AC006023.2-201ENST00000609916 167 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC4Q92889 SNORA50A-202ENST00000629536 136 ntBASIC4.11□□□□□ -1.75
ERCC4Q92889 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.11□□□□□ -1.75
ERCC4Q92889 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.11□□□□□ -1.75
ERCC4Q92889 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms