Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 HMGN2P26-201ENST00000463169 339 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 RPL27AP5-201ENST00000469428 449 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AC006445.1-201ENST00000491925 405 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 RPL7P47-201ENST00000497299 556 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AC026333.2-201ENST00000542164 106 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 BNIP3P6-201ENST00000549284 499 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 EIF4BP1-201ENST00000554881 351 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 MIR5692A1-201ENST00000580523 69 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AC073539.2-201ENST00000597113 165 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AC006504.8-201ENST00000621046 635 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AP003400.5-201ENST00000624827 617 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AC099654.14-201ENST00000638599 341 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC005183.1-201ENST00000603687 1979 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 Y_RNA.399-201ENST00000383955 105 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 RNU6-434P-201ENST00000384376 107 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 RNU6-45P-201ENST00000384471 107 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 RNU6-332P-201ENST00000391193 108 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 RNU6-1077P-201ENST00000410506 102 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 RNU4-47P-201ENST00000410876 114 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC099548.1-201ENST00000421443 426 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 RPL21P109-201ENST00000422213 475 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 COTL1P1-201ENST00000422309 375 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 RPL21P93-201ENST00000480465 489 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC008716.1-201ENST00000511084 513 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC112206.3-201ENST00000514578 389 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 RNU2-69P-201ENST00000516061 100 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC025755.1-201ENST00000521306 278 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 CENPUP1-201ENST00000526649 1202 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 MIR4474-201ENST00000579189 78 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 LARP7P3-201ENST00000579888 337 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 MIR6852-201ENST00000621699 66 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC006111.3-201ENST00000622137 383 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 DUXAP9-208ENST00000622815 614 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC005858.4-201ENST00000623191 700 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 MTND4P35-201ENST00000604257 1375 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 CASC19-280ENST00000642102 1351 ntBASIC3.35□□□□□ -1.87
HMGB4Q8WW32 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGB4Q8WW32 AC068647.1-201ENST00000489539 2265 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 MIR422A-201ENST00000362286 90 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 Y_RNA.157-201ENST00000363638 102 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 RNU6-82P-201ENST00000363970 107 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 RNU6-522P-201ENST00000364497 107 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 Y_RNA.378-201ENST00000365652 113 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 RNU6-328P-201ENST00000390887 106 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 MIR888-201ENST00000401186 77 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC007390.1-201ENST00000415722 356 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 ARL5AP1-201ENST00000418991 388 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 RPL23AP82-202ENST00000427528 469 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 BRK1P2-201ENST00000442875 223 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC010099.1-201ENST00000455434 375 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC004801.2-202ENST00000463559 283 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 S100A11P2-201ENST00000467589 312 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 RNU6-1038P-201ENST00000516516 104 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 RNU6-703P-201ENST00000516946 107 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC118273.2-201ENST00000532092 465 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 OR11H5P-201ENST00000554039 926 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC012119.1-201ENST00000603184 222 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC073657.2-201ENST00000605661 303 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 XIST_intron.1-201ENST00000619444 68 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 PLCE1P1-201ENST00000622094 305 ntBASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms