Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC009712.1-201ENST00000564938 316 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 MIR4781-201ENST00000585250 76 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AP001269.3-201ENST00000588718 329 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 BNIP3P27-201ENST00000599991 412 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AP000403.1-201ENST00000603349 851 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AL357094.1-201ENST00000603845 844 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 MTND4LP5-201ENST00000605152 292 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC131235.4-201ENST00000609288 620 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC245297.2-201ENST00000610119 565 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC116618.1-201ENST00000634617 774 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 MTND5P33-201ENST00000571250 1450 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC010889.1-201ENST00000566193 2666 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC110491.1-201ENST00000562191 2010 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 RNY1P10-201ENST00000363268 113 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 RNU6-289P-201ENST00000364093 107 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 SUMO2P12-201ENST00000405924 140 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 RNU4-22P-201ENST00000411058 166 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 NDUFS5P4-201ENST00000412983 318 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AP1B1P2-201ENST00000416196 106 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 CYCSP48-201ENST00000417124 323 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 SKA2P1-201ENST00000425592 390 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 TXNL1P1-201ENST00000429528 554 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 MED14P1-201ENST00000430517 648 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 RSU1P2-202ENST00000437884 485 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 TPT1P14-201ENST00000448018 505 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AP000542.1-201ENST00000448473 371 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 MTND1P16-201ENST00000465177 898 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 RPS15AP36-201ENST00000492022 382 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC110760.3-202ENST00000515177 371 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 SUB1P3-201ENST00000564581 315 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.6-201ENST00000603753 252 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 MTND3P19-201ENST00000603825 345 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.11-201ENST00000604059 253 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.10-201ENST00000604330 253 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AC008162.1-201ENST00000604718 254 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.1-201ENST00000604752 252 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.2-201ENST00000604983 252 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.5-201ENST00000605253 252 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.4-201ENST00000605279 254 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.12-201ENST00000605291 253 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.8-201ENST00000605353 252 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.9-201ENST00000605428 253 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL670379.7-201ENST00000605823 252 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 AL121652.1-201ENST00000608851 448 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 SDR42E1P4-201ENST00000620894 481 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 ZNF876P-202ENST00000398732 1485 ntBASIC1.6□□□□□ -2.15
LMX1AQ8TE12 RNU6-462P-201ENST00000362659 105 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 RNU6-432P-201ENST00000384196 109 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 USP9YP33-201ENST00000412220 421 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AL109913.1-201ENST00000421173 514 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.59□□□□□ -2.15
LMX1AQ8TE12 HMGN2P19-201ENST00000425149 265 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 MTND1P28-201ENST00000435623 950 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 USP9YP35-201ENST00000435696 412 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 SNRPEP9-201ENST00000436794 238 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 MTCO2P20-201ENST00000437339 673 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 EEF1A1P39-201ENST00000440791 250 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 MTATP6P30-201ENST00000443540 664 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC124916.1-201ENST00000444020 547 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.59□□□□□ -2.15
LMX1AQ8TE12 MTATP6P14-201ENST00000455189 673 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC134050.1-201ENST00000495088 933 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 RPS27AP10-201ENST00000496103 208 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC026801.1-201ENST00000497178 464 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC116353.3-201ENST00000511215 249 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC112206.4-201ENST00000515142 405 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 MIR892C-201ENST00000516410 77 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC007151.1-201ENST00000572774 483 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.59□□□□□ -2.15
LMX1AQ8TE12 MIR3199-1-201ENST00000582434 88 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC002545.1-201ENST00000592511 181 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AC021171.1-201ENST00000603137 706 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AL596327.1-201ENST00000603629 213 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AL021997.1-201ENST00000605757 193 ntBASIC1.59□□□□□ -2.15
LMX1AQ8TE12 AL512598.1-201ENST00000610158 273 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms