Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AL592156.1-201ENST00000508758 304 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 RNU6-1234P-201ENST00000516877 103 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 LRRC37A5P-203ENST00000580181 585 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 RN7SL176P-201ENST00000580352 264 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 TUG1_2.1-201ENST00000614234 87 ntBASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD1Q8NHV4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 UBE2WP1-201ENST00000362030 340 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 SNORA70C-201ENST00000384538 135 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 MIR578-201ENST00000384828 96 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 Y_RNA.623-201ENST00000411128 95 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 RPS15AP6-201ENST00000420703 385 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 OOSP1P1-201ENST00000423265 274 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 AL591043.1-201ENST00000432461 424 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 AL137159.1-201ENST00000452808 512 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 AP001025.1-201ENST00000486139 332 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 RNA5SP519-201ENST00000516480 119 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 RN7SKP21-201ENST00000516503 220 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 Y_RNA.686-201ENST00000516548 134 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 RN7SKP60-201ENST00000516985 239 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 AC091144.1-201ENST00000519573 138 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 AL670379.2-201ENST00000604983 252 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 SNORD91B-202ENST00000608459 222 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 AC009318.2-201ENST00000610917 651 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 MIR8059-201ENST00000620427 81 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
NEDD1Q8NHV4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 RPL9P7-201ENST00000330965 580 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 RNA5SP267-201ENST00000364893 126 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 RNU6-1289P-201ENST00000384431 106 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 MIR195-201ENST00000385194 87 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 SNORA12.2-201ENST00000391040 156 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 RNY4P18-201ENST00000391107 89 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 HSPE1P8-201ENST00000406997 288 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 MIR1911-201ENST00000410783 80 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 RNU6-607P-201ENST00000411283 108 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 AL358453.1-201ENST00000422522 250 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 PTGES3P4-201ENST00000426243 356 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 MTND4LP9-201ENST00000427694 174 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 AL513043.1-201ENST00000439124 535 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 PIGFP3-201ENST00000441918 722 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 EIF4A1P11-201ENST00000451239 222 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 AC079354.2-201ENST00000453523 154 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 SNORA31.9-201ENST00000516429 84 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 AL590705.4-201ENST00000532209 134 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 MIR4679-2-201ENST00000578358 77 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 MIR3613-201ENST00000579844 87 ntBASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD1Q8NHV4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 MAPK10-320ENST00000641462 6696 ntBASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 RNU1-20P-201ENST00000363314 162 ntBASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 RNU6-151P-201ENST00000364158 107 ntBASIC5.03□□□□□ -1.6
NEDD1Q8NHV4 MIR521-1-201ENST00000384902 87 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms