Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AL160275.3-201ENST00000423876 471 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC018644.1-201ENST00000429934 551 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC092427.1-202ENST00000430569 476 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 MTCO3P5-201ENST00000433620 714 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 MTND4P32-201ENST00000437189 1237 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC009296.1-201ENST00000443146 155 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 H2AFZP6-201ENST00000444403 394 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 TRBV1-201ENST00000476502 284 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC068587.1-201ENST00000483613 781 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC006445.1-201ENST00000491925 405 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 SNORA31.19-201ENST00000517079 126 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AP002963.1-201ENST00000530590 184 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC006199.1-201ENST00000548728 219 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 ADI1P3-201ENST00000549509 470 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC007336.1-201ENST00000576365 3828 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC008521.1-201ENST00000587471 187 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC098848.2-201ENST00000588023 330 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AL158032.1-201ENST00000605401 106 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AL109618.2-201ENST00000605527 211 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AL589743.7-201ENST00000612637 233 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC005332.10-201ENST00000612725 619 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 MIR7112-201ENST00000616126 65 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC072046.2-201ENST00000618366 268 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 U6.99-201ENST00000637524 83 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 Y_RNA.51-201ENST00000362725 102 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 RNU6-181P-201ENST00000363225 107 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 RNU6-179P-201ENST00000363350 107 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 SNORA68.1-201ENST00000364537 132 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 RN7SKP226-201ENST00000364912 300 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 RNU6-395P-201ENST00000365662 106 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 RNU6-166P-201ENST00000384371 107 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 MIR1-2-201ENST00000384961 85 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 CISD1P1-201ENST00000393907 327 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AL513475.1-201ENST00000406602 315 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 DPPA3P1-201ENST00000448050 469 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 NUTF2P7-201ENST00000453086 375 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 MTND4P2-201ENST00000507767 1203 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 RBBP4P6-201ENST00000508098 202 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC117522.2-201ENST00000510049 657 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 SNORD27.1-201ENST00000516319 72 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 RNU6-445P-201ENST00000516949 107 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 SNORD19.2-201ENST00000516978 73 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC078814.3-201ENST00000553036 491 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 MIR5004-201ENST00000579078 107 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 MIR5194-201ENST00000582634 120 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 NBR2-204ENST00000587322 63 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 VN1R85P-201ENST00000601587 426 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC126118.1-201ENST00000607744 628 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AP001486.3-201ENST00000615334 372 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 AC024940.5-201ENST00000622889 474 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 MIR3199-2-201ENST00000636243 86 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 MTND5P17-201ENST00000418405 1603 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 MTND5P1-201ENST00000445440 1375 ntBASIC2.48□□□□□ -2.01
CCDC197Q8NCU1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 ADAM3A-203ENST00000461344 2157 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 Y_RNA.359-201ENST00000365498 102 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 RNA5SP21-201ENST00000410917 96 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 RNU6-387P-201ENST00000411331 105 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 MTCYBP5-201ENST00000423752 1135 ntBASIC2.47□□□□□ -2.01
CCDC197Q8NCU1 AC005326.1-201ENST00000429197 123 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms