Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 DYNLL1P5-201ENST00000467158 270 ntBASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 RPL23AP45-201ENST00000476406 468 ntBASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 RN7SL636P-201ENST00000497504 294 ntBASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 RNU2-10P-201ENST00000516375 211 ntBASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 NRBF2P1-201ENST00000587407 859 ntBASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 AC093591.3-201ENST00000634516 308 ntBASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 MTND5P42-201ENST00000637720 498 ntBASIC2.51□□□□□ -2.01
HDDC3Q8N4P3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 SMIM11P1-201ENST00000369586 178 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 RNU6-190P-201ENST00000384154 102 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 RNU6-482P-201ENST00000391068 107 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 RN7SKP223-201ENST00000410582 62 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 OR51A5P-201ENST00000415429 942 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 EIF4EP4-201ENST00000424916 578 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AC093106.2-201ENST00000428212 385 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AL591806.2-201ENST00000433122 173 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AC118469.1-201ENST00000442943 488 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 BTF3P15-201ENST00000455606 336 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AC112204.1-201ENST00000502591 103 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AC025755.1-201ENST00000521306 278 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AC004486.1-201ENST00000546846 233 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AC025754.2-201ENST00000606491 432 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 AC022893.3-201ENST00000607665 437 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 BX664608.1-201ENST00000610519 487 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 MAPK10-266ENST00000641066 6555 ntBASIC2.5□□□□□ -2.01
HDDC3Q8N4P3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 RNU6-511P-201ENST00000363496 107 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 RNU5E-6P-201ENST00000365574 115 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 MTCYBP39-201ENST00000437562 491 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 AP000705.1-201ENST00000454567 350 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 AL139824.2-201ENST00000458731 1095 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 MTND2P14-201ENST00000482139 351 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 AC023194.1-201ENST00000493084 308 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 SNORA31.19-201ENST00000517079 126 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 AC107934.1-201ENST00000522215 217 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 RANP3-201ENST00000530970 276 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 LINC00933-203ENST00000559812 219 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 SNORD14A-201ENST00000606526 91 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 MIR6134-201ENST00000617606 109 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 CU459211.1-201ENST00000635667 749 ntBASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HDDC3Q8N4P3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 RNU6-898P-201ENST00000365627 104 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 RNU6-533P-201ENST00000384144 107 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AL359511.1-201ENST00000402970 211 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 RPS3AP44-201ENST00000425466 790 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AC004383.1-201ENST00000438135 289 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 RPS15AP9-201ENST00000439856 381 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AL078601.1-201ENST00000444542 271 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AL606662.1-201ENST00000445763 553 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 RPL36AP48-201ENST00000485521 314 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AC116655.1-201ENST00000508324 901 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AF131216.2-201ENST00000512316 564 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 SMURF2P1-201ENST00000514992 481 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 SNORA25.11-201ENST00000515935 105 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 RNU6-914P-201ENST00000516749 109 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 ACA59.2-201ENST00000517061 156 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 RNU6-1315P-201ENST00000517187 99 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AC009902.1-201ENST00000519351 183 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AL133241.1-201ENST00000556832 487 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 ZNF519P3-201ENST00000557158 1032 ntBASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.48□□□□□ -2.01
HDDC3Q8N4P3 PCMTD1P2-201ENST00000565017 355 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms