Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 U6.114-201ENST00000636407 96 ntBASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LINC01561Q8N1V8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RNU6-1010P-201ENST00000362757 107 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RNU6-371P-201ENST00000364283 108 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 SNORD115-7-201ENST00000365306 82 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RNU6-74P-201ENST00000384235 107 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RNU6-843P-201ENST00000384454 104 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RNU6-1179P-201ENST00000384667 107 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 MIR578-201ENST00000384828 96 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 MIR181B1-201ENST00000385240 110 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AL451074.5-201ENST00000415894 435 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 TOMM20P4-201ENST00000427861 435 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC133104.1-201ENST00000429100 218 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AL365400.1-201ENST00000431854 640 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RPL7P12-201ENST00000446719 750 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AL133547.1-201ENST00000448546 220 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC012308.1-201ENST00000451232 178 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RPS27AP8-201ENST00000452665 445 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 CYP2C59P-201ENST00000457790 269 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 RBBP4P6-201ENST00000508098 202 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AF213884.2-201ENST00000510417 903 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 MTCO3P28-201ENST00000513351 515 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 SNORA31.15-201ENST00000516771 132 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AP002404.1-201ENST00000532005 451 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC136619.2-201ENST00000563361 631 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC023043.3-201ENST00000593113 385 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC090115.4-201ENST00000609970 188 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 MIR378J-201ENST00000611988 109 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 MIR5739-201ENST00000619803 80 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AL034408.1-202ENST00000636088 415 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 CKAP2P1-201ENST00000555477 2049 ntBASIC2.05□□□□□ -2.08
LINC01561Q8N1V8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 SNORD3E-201ENST00000362899 217 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 RNU6-942P-201ENST00000363002 107 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 RNU1-33P-201ENST00000364249 162 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 RNU1-52P-201ENST00000384190 164 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 Y_RNA.576-201ENST00000384781 102 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 MIR95-201ENST00000385072 81 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AL592148.1-201ENST00000413568 445 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 OR6C66P-201ENST00000414917 930 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 CYCSP48-201ENST00000417124 323 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 RPL31P35-201ENST00000431058 377 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 KATNBL1P3-201ENST00000443475 909 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 H2AFZP6-201ENST00000444403 394 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 VN1R34P-201ENST00000447387 883 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AL360271.2-201ENST00000447710 161 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 RNU7-182P-201ENST00000459009 62 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC008571.1-201ENST00000467232 300 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 GMFBP1-201ENST00000467831 427 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 RPS27AP9-201ENST00000477681 438 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC117522.3-201ENST00000507974 584 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC117522.2-201ENST00000510049 657 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC104136.1-201ENST00000512969 394 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 RPL7P20-201ENST00000520308 745 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC011611.1-201ENST00000552179 197 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 PSMA3P-201ENST00000555485 635 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 DEFB131E-202ENST00000602581 683 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 Z99497.2-201ENST00000603634 310 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AL670379.4-201ENST00000605279 254 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC087752.4-201ENST00000605911 462 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 SEPT14P19-203ENST00000633205 211 ntBASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01561Q8N1V8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LINC01561Q8N1V8 SNORD114-19-201ENST00000363072 75 ntBASIC2.03□□□□□ -2.08
LINC01561Q8N1V8 RNA5SP393-201ENST00000363423 117 ntBASIC2.03□□□□□ -2.08
LINC01561Q8N1V8 RNA5SP125-201ENST00000364843 120 ntBASIC2.03□□□□□ -2.08
LINC01561Q8N1V8 U3.19-201ENST00000390893 196 ntBASIC2.03□□□□□ -2.08
LINC01561Q8N1V8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.03□□□□□ -2.08
LINC01561Q8N1V8 RN7SKP142-201ENST00000411236 328 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms