Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR5684-201ENST00000585074 65 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AC090132.2-201ENST00000615881 347 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AL713922.2-201ENST00000619384 716 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AC022893.2-201ENST00000564832 3296 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 RPL9P7-201ENST00000330965 580 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-933P-201ENST00000384424 107 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-1222P-201ENST00000384615 107 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 PPIAP31-201ENST00000405422 495 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-1156P-201ENST00000410365 100 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 AL691449.1-201ENST00000426570 421 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 MYL8P-204ENST00000431574 518 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 AL513043.1-201ENST00000439124 535 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 DAP3P1-201ENST00000441522 278 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 PIGFP3-201ENST00000441918 722 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 HMGN2P21-201ENST00000447764 270 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 RPL9P9-202ENST00000466501 579 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 AC010655.3-201ENST00000478818 450 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 KC877373.1-201ENST00000479066 408 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 MRPS35P2-201ENST00000508242 191 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 Y_RNA.721-201ENST00000517207 102 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 AP002826.1-201ENST00000608835 315 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 MIR6875-201ENST00000617506 72 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 MIR4727-201ENST00000622232 55 ntBASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM48Q8IWZ4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 LINC02471-203ENST00000641941 4752 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RNY1P16-201ENST00000363063 111 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-596P-201ENST00000365395 98 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RNU1-64P-201ENST00000365443 163 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-827P-201ENST00000365553 106 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 AL513475.1-201ENST00000406602 315 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 EI24P1-201ENST00000416584 867 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 AL096701.2-201ENST00000416920 238 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RPL21P2-201ENST00000440049 481 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 OR2AQ1P-201ENST00000451972 200 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RPS20P22-201ENST00000473700 357 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 SNORA70.16-201ENST00000516390 95 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 AC120057.2-201ENST00000571520 271 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 MIR3921-201ENST00000577308 85 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 AL606490.9-201ENST00000603331 271 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 PRR13P7-201ENST00000605538 430 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 FP236240.3-201ENST00000623061 327 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 BMS1P21-201ENST00000634565 365 ntBASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM48Q8IWZ4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR412-201ENST00000362142 91 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 Y_RNA.533-201ENST00000384596 114 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR521-1-201ENST00000384902 87 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 MIR708-201ENST00000390708 88 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 SNORD56-201ENST00000413522 71 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 NUP35P1-201ENST00000422734 947 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AC133473.1-201ENST00000455173 299 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AC112492.4-201ENST00000456549 352 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 RNU7-169P-201ENST00000459456 61 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-1037P-201ENST00000459571 107 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 RN7SL132P-201ENST00000478131 296 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 RPS26P15-201ENST00000488067 348 ntBASIC3.97□□□□□ -1.77
TRIM48Q8IWZ4 AC069499.1-201ENST00000489433 509 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms