Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC010486.1-201ENST00000511793 424 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 MIR2276-201ENST00000516886 89 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 RNU6-685P-201ENST00000517088 95 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 IGHV3-76-201ENST00000522465 295 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC016957.1-201ENST00000534895 309 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 MIR5692A1-201ENST00000580523 69 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 ELOCP29-201ENST00000588193 334 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 uc_338.25-201ENST00000613756 156 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 U4.5-201ENST00000617137 123 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC024940.5-201ENST00000622889 474 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC011155.2-201ENST00000623202 216 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC027514.1-201ENST00000588561 1603 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 SNORA4.3-201ENST00000365564 137 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 SNORD15B-201ENST00000384714 146 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AL139095.1-201ENST00000404326 391 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 RNU4-46P-201ENST00000410818 138 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 OOSP1P1-201ENST00000423265 274 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 MTCO3P30-201ENST00000426425 670 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 C8orf59P1-201ENST00000429930 303 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 RPS29P26-201ENST00000477483 171 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC009646.1-201ENST00000510455 318 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 RNA5SP367-201ENST00000516557 118 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 SNORA31.21-201ENST00000517180 77 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AP003122.3-201ENST00000526316 255 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC084851.1-201ENST00000529105 249 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AL157871.3-201ENST00000557231 293 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC068135.2-201ENST00000569293 1028 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AP003465.2-201ENST00000602571 373 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AP001330.5-201ENST00000607176 411 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 U6.42-201ENST00000618440 107 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC068137.3-201ENST00000639191 341 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC073869.6-201ENST00000640656 341 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 AC010680.1-201ENST00000590024 3590 ntBASIC3.39□□□□□ -1.87
HERC6Q8IVU3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HERC6Q8IVU3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AL136360.1-201ENST00000503377 1900 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AC103988.1-201ENST00000566382 2177 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AC110774.1-201ENST00000623567 2018 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 RNU1-105P-201ENST00000363470 161 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 RNA5SP139-201ENST00000364340 117 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 RNU6-996P-201ENST00000365438 107 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 RNU6-116P-201ENST00000384042 109 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 RPL7P46-201ENST00000425129 740 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 RPS15AP9-201ENST00000439856 381 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AC104058.1-201ENST00000448028 297 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 MTATP6P7-201ENST00000453315 681 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AC104472.2-201ENST00000469035 601 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AC126182.1-201ENST00000478134 357 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AL512360.1-201ENST00000555346 234 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 MIR4703-201ENST00000577728 79 ntBASIC3.38□□□□□ -1.87
HERC6Q8IVU3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms