Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC069499.1-201ENST00000489433 509 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 AC022493.1-201ENST00000492984 337 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 HMGN1P11-201ENST00000508668 303 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.75□□□□□ -1.65
USP48Q86UV5 AC107016.1-201ENST00000550463 337 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.75□□□□□ -1.65
USP48Q86UV5 AC103858.2-201ENST00000621471 543 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.75□□□□□ -1.65
USP48Q86UV5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP48Q86UV5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP48Q86UV5 AC005183.1-201ENST00000603687 1979 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP48Q86UV5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USP48Q86UV5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP48Q86UV5 SNORD35B-201ENST00000363660 87 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 Y_RNA.187-201ENST00000363918 113 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 Y_RNA.459-201ENST00000384251 102 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 RNU6-574P-201ENST00000384265 107 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 RNU6-463P-201ENST00000384340 107 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 RNU6-1025P-201ENST00000410629 104 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 RNU2-71P-201ENST00000411395 189 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 AL358176.2-201ENST00000425769 204 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 RPS6P12-201ENST00000432491 726 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 PIGFP3-201ENST00000441918 722 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 AL137792.2-201ENST00000443484 235 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 AC009237.8-201ENST00000445492 379 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 AC093303.1-201ENST00000514549 295 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 RNU6-1016P-201ENST00000516689 94 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 AC007991.1-201ENST00000522680 631 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.74□□□□□ -1.65
USP48Q86UV5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.74□□□□□ -1.65
USP48Q86UV5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.74□□□□□ -1.65
USP48Q86UV5 CYP2C61P-201ENST00000604072 290 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 AC133104.2-201ENST00000615272 193 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 MAPK10-372ENST00000641954 3413 ntBASIC4.74□□□□□ -1.65
USP48Q86UV5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USP48Q86UV5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP48Q86UV5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP48Q86UV5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP48Q86UV5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP48Q86UV5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP48Q86UV5 RNA5SP97-201ENST00000365006 84 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP48Q86UV5 AL590632.1-201ENST00000424289 371 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AC087650.1-201ENST00000431445 468 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AL159987.2-201ENST00000432754 307 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.73□□□□□ -1.65
USP48Q86UV5 RANP8-201ENST00000444720 713 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.73□□□□□ -1.65
USP48Q86UV5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.73□□□□□ -1.65
USP48Q86UV5 AC084198.1-201ENST00000477747 402 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 KC877373.1-201ENST00000479066 408 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AC116337.1-201ENST00000509680 687 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AC096745.1-201ENST00000509945 370 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.73□□□□□ -1.65
USP48Q86UV5 RNU7-143P-201ENST00000516781 65 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 SCARNA14-201ENST00000516903 136 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 RNU1-54P-201ENST00000517181 120 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.73□□□□□ -1.65
USP48Q86UV5 AC022634.1-201ENST00000520765 532 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.73□□□□□ -1.65
USP48Q86UV5 NUTF2P8-201ENST00000604593 363 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AC006023.2-201ENST00000609916 167 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP48Q86UV5 MIR6128-201ENST00000615528 109 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 AC098657.3-201ENST00000620434 263 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.73□□□□□ -1.65
USP48Q86UV5 AC244517.12-201ENST00000623581 663 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP48Q86UV5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP48Q86UV5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP48Q86UV5 FAM35DP-201ENST00000323387 2712 ntBASIC4.73□□□□□ -1.65
USP48Q86UV5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP48Q86UV5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP48Q86UV5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
USP48Q86UV5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP48Q86UV5 AC138393.1-203ENST00000327086 343 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 RNU6-50P-201ENST00000362356 103 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 RNU1-89P-201ENST00000384592 164 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 RNU2-3P-201ENST00000410144 191 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 AL139247.1-201ENST00000422768 325 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 UBE2V1P4-201ENST00000425374 344 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.72□□□□□ -1.65
USP48Q86UV5 CYCSP35-201ENST00000451978 304 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.72□□□□□ -1.65
USP48Q86UV5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
USP48Q86UV5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.72□□□□□ -1.65
USP48Q86UV5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.72□□□□□ -1.65
USP48Q86UV5 YPEL5P3-201ENST00000547227 352 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 TRAV37-201ENST00000553906 342 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 TRAV28-201ENST00000557548 323 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.72□□□□□ -1.65
USP48Q86UV5 AC020914.4-201ENST00000597690 277 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 AP000654.2-201ENST00000605633 586 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 RNU6-85P-201ENST00000605989 107 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 AL157817.1-201ENST00000614264 790 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 RMST_4.1-201ENST00000616886 107 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.72□□□□□ -1.65
USP48Q86UV5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.72□□□□□ -1.65
USP48Q86UV5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms