Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-1153P-201ENST00000516760 105 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AC007619.2-201ENST00000605743 379 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AF117829.1-206ENST00000621883 3802 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AL133216.2-202ENST00000634512 349 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.58-201ENST00000362807 102 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.154-201ENST00000363624 102 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 RNY3P1-201ENST00000365085 102 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 RNY3-201ENST00000365484 102 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-629P-201ENST00000384061 103 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 SNORA54-201ENST00000384281 123 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 SNORA36C-201ENST00000384289 132 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.490-201ENST00000384413 102 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 AL159169.1-201ENST00000421119 127 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 MTCO1P39-201ENST00000426148 480 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 NEFMP1-201ENST00000443423 1006 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 RPL31P13-201ENST00000484151 370 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 AP001086.1-201ENST00000494882 321 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 MTCO1P29-201ENST00000496868 288 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 ERHP1-201ENST00000523006 310 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 SNORD84-203ENST00000584275 78 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 AC104763.2-201ENST00000604179 382 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.95□□□□□ -1.78
UBE3BQ7Z3V4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.67-201ENST00000362870 100 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 SNORA7.2-201ENST00000364446 145 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-335P-201ENST00000364563 113 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 Y_RNA.431-201ENST00000384086 102 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 MIR607-201ENST00000385241 96 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 POLHP1-201ENST00000411806 470 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 RPL31P12-201ENST00000422587 358 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 RPS15AP27-201ENST00000449183 343 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 HMGN2P7-201ENST00000456186 273 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 SCARNA18-201ENST00000459004 134 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 RPL21P93-201ENST00000480465 489 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC083904.1-201ENST00000487828 231 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-123P-201ENST00000516163 102 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AP004371.1-201ENST00000525240 214 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 RPL23AP84-201ENST00000571193 464 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 BDH2P1-201ENST00000602288 736 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC064836.2-201ENST00000609491 462 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC009570.1-201ENST00000609599 745 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC103705.1-201ENST00000619013 241 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC099506.2-201ENST00000623074 221 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 AC091903.1-201ENST00000624322 454 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 MTND5P42-201ENST00000637720 498 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
UBE3BQ7Z3V4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 USP8P1-201ENST00000494673 3183 ntBASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.93□□□□□ -1.78
UBE3BQ7Z3V4 AC007496.3-201ENST00000624987 3443 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms