Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 MTND5P6-201ENST00000422338 1798 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 RNU1-15P-201ENST00000353977 144 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 MIR517A-201ENST00000385001 87 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 RNU6-712P-201ENST00000410558 100 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 RNU6-293P-201ENST00000411259 106 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 BX276092.3-201ENST00000424182 230 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 AC010655.1-201ENST00000449336 292 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 AL645939.1-201ENST00000453429 797 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 AC022795.1-201ENST00000473808 480 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 RN7SL271P-201ENST00000487601 295 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 HMGB1P35-201ENST00000503360 598 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 Vault.1-201ENST00000516474 102 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 SCARNA14-201ENST00000516903 136 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 AL121603.1-201ENST00000553815 142 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 AC109446.1-201ENST00000566172 220 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 AC012433.1-201ENST00000588916 398 ntBASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNKSR3Q6P9H4 AC018529.3-201ENST00000624212 2254 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 Y_RNA.785-201ENST00000384290 109 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 AC092809.3-201ENST00000415453 231 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 HSPD1P21-201ENST00000436541 245 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 USP9YP7-201ENST00000436723 430 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 USP9YP32-201ENST00000452432 430 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 AC010631.1-201ENST00000474150 156 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 RPL17P19-201ENST00000489069 552 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 AC093852.1-201ENST00000503587 266 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 AC087369.1-201ENST00000520775 996 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 AC126177.3-201ENST00000551839 688 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 AC090517.1-201ENST00000569307 266 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 MIR3200-201ENST00000580767 85 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 ELOCP5-201ENST00000604924 333 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 AC064801.1-201ENST00000612025 407 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 U6.105-201ENST00000637379 88 ntBASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.26□□□□□ -1.73
CNKSR3Q6P9H4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 Y_RNA.19-201ENST00000362462 99 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 Y_RNA.48-201ENST00000362710 103 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 RNU6-774P-201ENST00000363238 107 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 RNU6-1303P-201ENST00000364841 107 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 Y_RNA.551-201ENST00000384661 102 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 Y_RNA.577-201ENST00000384794 101 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 MIR195-201ENST00000385194 87 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AL138885.1-201ENST00000405921 675 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 MIR1251-201ENST00000408552 70 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 RNU6-1156P-201ENST00000410365 100 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 RAC1P3-201ENST00000416129 580 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AL137014.1-201ENST00000420490 1226 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 SDAD1P3-201ENST00000427380 333 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AL353997.1-201ENST00000432936 108 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 FCF1P4-201ENST00000448326 183 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AL031274.1-201ENST00000450334 232 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 MTCO3P8-201ENST00000453691 755 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC106707.2-201ENST00000484182 374 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC011005.2-201ENST00000487324 359 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC104619.4-201ENST00000510773 249 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC074250.1-201ENST00000511117 192 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 Y_RNA.689-201ENST00000516589 107 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC007991.1-201ENST00000522680 631 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AP004371.1-201ENST00000525240 214 ntBASIC4.25□□□□□ -1.73
CNKSR3Q6P9H4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms