Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 U8.8-201ENST00000365399 135 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 RNU6-395P-201ENST00000365662 106 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 MIR1302-8-201ENST00000408342 128 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 U6atac.2-201ENST00000408644 118 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 CYCSP48-201ENST00000417124 323 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 ELOCP4-201ENST00000420090 333 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 Z99497.1-201ENST00000421282 135 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 NUP35P1-201ENST00000422734 947 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AL356583.2-201ENST00000426536 280 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AL589872.1-201ENST00000426602 288 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 UBE2D3P4-201ENST00000441973 436 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC003071.1-201ENST00000451219 789 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 RNU7-125P-201ENST00000458760 62 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AP000852.1-201ENST00000472460 573 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 SNORA31.15-201ENST00000516771 132 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AP003122.4-201ENST00000530980 758 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC243972.3-201ENST00000539655 198 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC008015.1-201ENST00000555505 465 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC005332.10-201ENST00000612725 619 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AL359547.2-201ENST00000615810 418 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 AC025048.6-202ENST00000627667 438 ntBASIC2.28□□□□□ -2.04
NIPAL3Q6P499 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NIPAL3Q6P499 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.28□□□□□ -2.05
NIPAL3Q6P499 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.28□□□□□ -2.05
NIPAL3Q6P499 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC093536.2-201ENST00000565257 1406 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 RNU4-1-201ENST00000363925 141 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 SNORA40C-201ENST00000391285 128 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC007064.1-201ENST00000412238 351 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC009518.2-201ENST00000418056 731 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC007283.2-201ENST00000424739 197 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 MTND5P25-201ENST00000430499 799 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC236972.1-201ENST00000433225 199 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 RPS15AP9-201ENST00000439856 381 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 MTND1P30-201ENST00000441241 901 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 USP9YP15-201ENST00000442391 422 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC108938.1-201ENST00000451204 136 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AL109933.2-201ENST00000452651 260 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 BZW1P2-201ENST00000473537 826 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 RPS3AP22-201ENST00000488297 769 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 MIR892C-201ENST00000516410 77 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 RNU6-232P-201ENST00000517144 64 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 RNU1-104P-201ENST00000517280 175 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC022878.1-201ENST00000530684 149 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AL353778.1-201ENST00000603149 408 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AL645944.1-201ENST00000603857 493 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AL022161.1-201ENST00000604390 213 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AL158032.1-201ENST00000605401 106 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AC018638.7-201ENST00000605836 1114 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NIPAL3Q6P499 AP003485.2-201ENST00000623636 610 ntBASIC2.27□□□□□ -2.05
NIPAL3Q6P499 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 RNU6-166P-201ENST00000384371 107 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 UBE2D3P1-201ENST00000436669 444 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 KATNBL1P6-201ENST00000453433 915 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC004263.1-201ENST00000479327 332 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 RPL36AP48-201ENST00000485521 314 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 FAM92A1P2-202ENST00000504766 877 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 OR5B19P-201ENST00000531766 928 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.26□□□□□ -2.05
NIPAL3Q6P499 HMGN1P30-201ENST00000589286 268 ntBASIC2.26□□□□□ -2.05
NIPAL3Q6P499 AF131215.7-201ENST00000602443 707 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms