Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MIR659-201ENST00000384963 97 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 MIR514A1-201ENST00000385133 98 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 RNU6-1140P-201ENST00000410517 106 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 MTCO1P39-201ENST00000426148 480 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 RPS6P12-201ENST00000432491 726 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 TOMM22P6-201ENST00000465035 409 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 AC108145.1-201ENST00000503770 153 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 RPL23AP78-201ENST00000599928 470 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 AC024940.4-201ENST00000605507 246 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 BRDTP1-201ENST00000605735 677 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 AC131238.1-201ENST00000617135 328 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 AP005019.3-201ENST00000620418 560 ntBASIC5.32□□□□□ -1.56
RNF20Q5VTR2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
RNF20Q5VTR2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 MIR448-201ENST00000362131 111 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 RNA5SP240-201ENST00000365355 128 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC017079.2-201ENST00000416102 485 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC073264.2-201ENST00000448886 166 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC010469.1-201ENST00000463864 576 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC231760.1-201ENST00000498002 260 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC074198.2-201ENST00000508153 258 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 Y_RNA.683-201ENST00000516508 93 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 RN7SKP272-201ENST00000516988 232 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC025755.1-201ENST00000521306 278 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC100770.1-201ENST00000532310 322 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 MIR4659A-201ENST00000580269 81 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AL139395.1-201ENST00000603662 160 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AL138721.1-201ENST00000616756 179 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 AC026951.1-201ENST00000559530 2459 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF20Q5VTR2 ASNSP1-201ENST00000518311 1939 ntBASIC5.31□□□□□ -1.56
RNF20Q5VTR2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 RNU6-227P-201ENST00000362865 103 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 TMSB10P2-201ENST00000416049 131 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 RPL21P40-201ENST00000428586 483 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 AC069285.2-201ENST00000440210 275 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 RN7SL354P-201ENST00000469282 294 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 RPS26P28-201ENST00000470806 348 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 ANXA2P1-201ENST00000505539 926 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 RNU6-496P-201ENST00000516145 99 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 RNU6-861P-201ENST00000516745 106 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 RPL23AP97-201ENST00000568955 471 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 FAM60BP-201ENST00000578364 658 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 SNORD84-203ENST00000584275 78 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 AC015813.4-201ENST00000610469 179 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 Mico1.1-201ENST00000611698 204 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 AC100827.5-201ENST00000615883 426 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 AC087190.4-201ENST00000574616 8334 ntBASIC5.3□□□□□ -1.56
RNF20Q5VTR2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF20Q5VTR2 AC010300.1-201ENST00000600671 5134 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 RNU6-682P-201ENST00000363843 106 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 RN7SKP167-201ENST00000411047 285 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AL358472.1-201ENST00000431295 329 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AL627311.1-201ENST00000431514 115 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AC104164.2-201ENST00000496953 495 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 MIR2355-201ENST00000517199 87 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AC109479.2-201ENST00000517842 174 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AP006289.1-201ENST00000538089 277 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 MTND6P33-201ENST00000571794 183 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AL160290.3-201ENST00000604869 165 ntBASIC5.29□□□□□ -1.56
RNF20Q5VTR2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 MIR7154-201ENST00000620673 73 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms