Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL035423.1-201ENST00000420331 213 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AL138785.1-201ENST00000425821 331 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AC087650.1-201ENST00000431445 468 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 BTF3P6-201ENST00000448054 499 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AL139109.1-201ENST00000455491 297 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AC104164.2-201ENST00000496953 495 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.676-201ENST00000516393 96 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 MIR2355-201ENST00000517199 87 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AC109479.2-201ENST00000517842 174 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AL590705.4-201ENST00000532209 134 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AC098826.3-201ENST00000603823 466 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 MAPK10-372ENST00000641954 3413 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 ASNSP1-201ENST00000518311 1939 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC007685.1-201ENST00000329806 452 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 RNU6-1167P-201ENST00000363227 94 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.439-201ENST00000384119 94 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 MIR490-201ENST00000384865 128 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 SNORD115-46-201ENST00000390982 71 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 MRPL35P1-201ENST00000404272 572 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AL080315.1-201ENST00000406055 466 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 RNA5SP494-201ENST00000410653 129 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 COTL1P1-201ENST00000422309 375 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC087190.1-201ENST00000484462 480 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC107032.1-201ENST00000485945 480 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 CYCSP30-201ENST00000546447 172 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AL442163.3-201ENST00000554110 156 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC022968.1-201ENST00000567372 442 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC002545.1-201ENST00000592511 181 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC073410.2-201ENST00000603240 332 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 AC009318.2-201ENST00000610917 651 ntBASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.84□□□□□ -1.63
COL13A1Q5TAT6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.84□□□□□ -1.64
COL13A1Q5TAT6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL13A1Q5TAT6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-37P-201ENST00000362692 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU5A-1-201ENST00000362698 116 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-11P-201ENST00000364234 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-512P-201ENST00000364438 103 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-7-201ENST00000364784 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-8-201ENST00000365467 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-25P-201ENST00000383873 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-1-201ENST00000383898 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-48P-201ENST00000384161 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-36P-201ENST00000384172 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-4P-201ENST00000384205 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-5P-201ENST00000384238 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-662P-201ENST00000384253 104 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-3P-201ENST00000384314 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-886P-201ENST00000384319 105 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-16P-201ENST00000384385 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-15P-201ENST00000384534 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-2-201ENST00000384627 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-29P-201ENST00000384637 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNU6-9-201ENST00000384776 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNA5SP120-201ENST00000410900 112 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 TOMM20P4-201ENST00000427861 435 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 MTND3P9-201ENST00000429526 346 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 AC012671.1-201ENST00000451912 203 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 AC098869.1-201ENST00000481627 292 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 AL592156.1-201ENST00000508758 304 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RNA5SP471-201ENST00000516971 106 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 IGKV2-38-201ENST00000517443 247 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 AC084851.1-201ENST00000529105 249 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 MIR4472-2-201ENST00000582069 67 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms