Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.5□□□□□ -1.85
PTCHD3Q3KNS1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 Y_RNA.339-201ENST00000365325 102 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 RNU6-128P-201ENST00000383976 107 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 RNU6-328P-201ENST00000390887 106 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 VN1R36P-201ENST00000414936 291 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 NDUFB1P2-201ENST00000449477 176 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 SNRPGP3-201ENST00000469405 227 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 RPL7P43-201ENST00000478876 753 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 RPL21P13-201ENST00000488305 481 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AC022493.1-201ENST00000492984 337 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 RNU6-566P-201ENST00000516790 107 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 RNU6-579P-201ENST00000516879 102 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 SNORA25.17-201ENST00000517184 124 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 ZNF192P1-203ENST00000565888 810 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 MIR4738-201ENST00000579134 87 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 RMST_4.1-201ENST00000616886 107 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.49□□□□□ -1.85
PTCHD3Q3KNS1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC007823.1-201ENST00000569932 1566 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 MIR412-201ENST00000362142 91 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 Y_RNA.135-201ENST00000363439 95 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 Y_RNA.387-201ENST00000383918 102 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 MIR218-2-201ENST00000385006 110 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AL360182.1-201ENST00000397433 468 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 MIR548K-201ENST00000408406 116 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 U3.39-201ENST00000408569 239 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC002075.2-201ENST00000425207 252 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC084357.1-201ENST00000473404 255 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 MTND3P25-201ENST00000509243 135 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 RNU6-1088P-201ENST00000516850 104 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC069113.1-201ENST00000517763 267 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC087854.1-201ENST00000519706 414 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 TRAV37-201ENST00000553906 342 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AL355375.2-201ENST00000574825 175 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 SRGNP1-201ENST00000603392 451 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC012468.1-201ENST00000604888 430 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AL138726.1-201ENST00000614873 333 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 FAM157A-202ENST00000615155 405 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AL031601.2-202ENST00000622650 282 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 MIR1302-1-201ENST00000637932 143 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC002546.1-201ENST00000588041 2504 ntBASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD3Q3KNS1 AC005183.1-201ENST00000603687 1979 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 SNORD9-201ENST00000362566 104 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 SNORD116-11-201ENST00000383882 92 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 Y_RNA.384-201ENST00000383909 102 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 RNU6-1179P-201ENST00000384667 107 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 RNU2-3P-201ENST00000410144 191 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 AC074085.1-201ENST00000413598 418 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 AL139396.1-201ENST00000421137 167 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 SAR1AP4-201ENST00000429225 591 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 MYL8P-204ENST00000431574 518 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 RPL32P28-201ENST00000443577 397 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 RPS29P31-201ENST00000446147 164 ntBASIC3.47□□□□□ -1.85
PTCHD3Q3KNS1 CECR9-201ENST00000453421 199 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms