Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 RPL7P29-201ENST00000437151 728 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.28□□□□□ -2.36
TFF3Q07654 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.28□□□□□ -2.36
TFF3Q07654 MTND5P8-201ENST00000449817 1083 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.28□□□□□ -2.36
TFF3Q07654 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.28□□□□□ -2.36
TFF3Q07654 AC145146.1-201ENST00000496370 254 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.28□□□□□ -2.36
TFF3Q07654 AC104108.1-201ENST00000509930 412 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 RNU7-40P-201ENST00000516397 64 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.28□□□□□ -2.36
TFF3Q07654 NIFKP8-201ENST00000560500 874 ntBASIC0.28□□□□□ -2.36
TFF3Q07654 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
TFF3Q07654 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
TFF3Q07654 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.28□□□□□ -2.36
TFF3Q07654 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.28□□□□□ -2.37
TFF3Q07654 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 U3.8-201ENST00000363675 217 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 MIR506-201ENST00000384998 124 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 MT-TP-201ENST00000387461 68 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 RNU6-1328P-201ENST00000410938 106 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 MTND4LP21-201ENST00000415303 295 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 LINC01347-201ENST00000417964 355 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 AL109913.1-201ENST00000421173 514 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 Z77249.1-201ENST00000444622 1175 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 GTF2IP12-201ENST00000456547 356 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 OR52A4P-202ENST00000481634 799 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 PSMC1P5-201ENST00000512850 177 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.27□□□□□ -2.37
TFF3Q07654 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.27□□□□□ -2.37
TFF3Q07654 AC093510.2-201ENST00000562820 896 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.27□□□□□ -2.37
TFF3Q07654 BNIP3P16-201ENST00000589779 534 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 AC004492.1-201ENST00000607036 742 ntBASIC0.27□□□□□ -2.37
TFF3Q07654 RNU4-67P-201ENST00000364569 141 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 RNU6-185P-201ENST00000384421 107 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 RNU6-748P-201ENST00000384648 107 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 RNU6-837P-201ENST00000391056 108 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 MTCO1P56-201ENST00000401674 224 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 MIR1250-201ENST00000408098 113 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 AC009310.1-201ENST00000414414 451 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 AC079776.3-201ENST00000450665 370 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 AC087477.1-201ENST00000465747 340 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.26□□□□□ -2.37
TFF3Q07654 ACA64.5-201ENST00000516207 127 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 MIR892C-201ENST00000516410 77 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 AC136628.3-201ENST00000521868 290 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 CENPUP1-201ENST00000526649 1202 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 MTND2P26-201ENST00000528255 1029 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.26□□□□□ -2.37
TFF3Q07654 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.26□□□□□ -2.37
TFF3Q07654 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
TFF3Q07654 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
TFF3Q07654 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.26□□□□□ -2.37
TFF3Q07654 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.26□□□□□ -2.37
TFF3Q07654 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
TFF3Q07654 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
TFF3Q07654 AL714022.1-201ENST00000439897 151 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 AC116337.2-201ENST00000477662 156 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.25□□□□□ -2.37
TFF3Q07654 AC133963.2-201ENST00000513686 578 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 SNORD116-28-201ENST00000516123 91 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.25□□□□□ -2.37
TFF3Q07654 AC006518.2-201ENST00000542513 940 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 MTND2P17-201ENST00000550281 688 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.25□□□□□ -2.37
TFF3Q07654 MIR3126-201ENST00000577443 74 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 AC068276.1-201ENST00000605793 379 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 FRG1HP-204ENST00000617940 757 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.25□□□□□ -2.37
TFF3Q07654 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.25□□□□□ -2.37
TFF3Q07654 AC009950.2-201ENST00000636548 183 ntBASIC0.25□□□□□ -2.37
TFF3Q07654 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
TFF3Q07654 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.24□□□□□ -2.37
TFF3Q07654 AL589994.1-201ENST00000404962 340 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.24□□□□□ -2.37
TFF3Q07654 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.24□□□□□ -2.37
TFF3Q07654 CR769776.1-201ENST00000441254 787 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.24□□□□□ -2.37
TFF3Q07654 SCARNA16.2-201ENST00000516520 172 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 AP003122.4-201ENST00000530980 758 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.24□□□□□ -2.37
TFF3Q07654 AP003034.1-201ENST00000534621 422 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.24□□□□□ -2.37
TFF3Q07654 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.24□□□□□ -2.37
TFF3Q07654 HMGB1P14-201ENST00000557424 591 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 AC090666.1-201ENST00000578241 445 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 MTCO2P2-201ENST00000591258 225 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 AL138478.1-201ENST00000612252 832 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 MIR6130-201ENST00000619419 109 ntBASIC0.24□□□□□ -2.37
TFF3Q07654 AC016716.1-201ENST00000265882 708 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 RNA5SP391-201ENST00000363456 119 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 SSXP10-201ENST00000402595 565 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 MRPL35P1-201ENST00000404272 572 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 HNRNPDP2-201ENST00000406475 478 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 AC000111.3-201ENST00000433478 193 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 TPMTP4-201ENST00000450749 678 ntBASIC0.23□□□□□ -2.37
TFF3Q07654 RNU7-23P-201ENST00000459465 62 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms