Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC-0.13□□□□□ -2.43
RPL39P62891 AC090079.2-201ENST00000575289 768 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC-0.13□□□□□ -2.43
RPL39P62891 CYP2C61P-201ENST00000604072 290 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 GMCL1P2-201ENST00000605230 823 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.13□□□□□ -2.43
RPL39P62891 FAM157B-203ENST00000639350 358 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC-0.13□□□□□ -2.43
RPL39P62891 TPTE2P4-201ENST00000258589 1605 ntBASIC-0.13□□□□□ -2.43
RPL39P62891 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC-0.14□□□□□ -2.43
RPL39P62891 LSM5-205ENST00000409952 687 ntTSL 4 BASIC-0.14□□□□□ -2.43
RPL39P62891 RNU6-516P-201ENST00000411381 104 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC-0.14□□□□□ -2.43
RPL39P62891 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC-0.14□□□□□ -2.43
RPL39P62891 MICF-203ENST00000432679 129 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AL596276.1-201ENST00000434465 418 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AL714022.1-201ENST00000439897 151 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 RNU7-23P-201ENST00000459465 62 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 RPS15AP17-201ENST00000470598 390 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AC116337.2-201ENST00000477662 156 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC-0.14□□□□□ -2.43
RPL39P62891 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.14□□□□□ -2.43
RPL39P62891 RNU5F-8P-201ENST00000515941 111 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AC087854.1-201ENST00000519706 414 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.14□□□□□ -2.43
RPL39P62891 AL356432.3-201ENST00000568952 465 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AC090666.1-201ENST00000578241 445 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 MIR4298-201ENST00000584380 73 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 LARP7P1-201ENST00000605576 316 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AC090970.3-201ENST00000612566 866 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 AC005832.2-201ENST00000538921 1430 ntBASIC-0.14□□□□□ -2.43
RPL39P62891 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC-0.15□□□□□ -2.43
RPL39P62891 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 AC114482.1-201ENST00000418010 247 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC-0.15□□□□□ -2.43
RPL39P62891 GTF2IP20-201ENST00000431663 360 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC-0.15□□□□□ -2.43
RPL39P62891 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.15□□□□□ -2.43
RPL39P62891 AL121594.1-201ENST00000475906 575 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
RPL39P62891 PDCD5P2-201ENST00000507570 312 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
RPL39P62891 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.15□□□□□ -2.43
RPL39P62891 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC-0.15□□□□□ -2.43
RPL39P62891 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC-0.15□□□□□ -2.43
RPL39P62891 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC-0.15□□□□□ -2.43
RPL39P62891 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC-0.15□□□□□ -2.43
RPL39P62891 AL078603.1-201ENST00000603824 313 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 RAC1P9-201ENST00000604990 392 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 AL360181.4-201ENST00000621752 134 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 AC004808.1-201ENST00000627671 721 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 GS1-279B7.1-204ENST00000641809 378 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
RPL39P62891 AC100821.1-201ENST00000523153 2479 ntBASIC-0.15□□□□□ -2.43
RPL39P62891 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
RPL39P62891 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC-0.16□□□□□ -2.44
RPL39P62891 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC-0.16□□□□□ -2.44
RPL39P62891 THAP5P1-201ENST00000439089 262 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 NEFMP1-201ENST00000443423 1006 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.16□□□□□ -2.44
RPL39P62891 snoU13.28-201ENST00000459235 104 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC-0.16□□□□□ -2.44
RPL39P62891 CYCSP23-201ENST00000519781 313 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 AC012669.1-201ENST00000603209 283 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 AC010900.2-201ENST00000604508 210 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 CENPF-206ENST00000614578 528 ntTSL 5 BASIC-0.16□□□□□ -2.44
RPL39P62891 AC024595.1-201ENST00000623088 387 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 MIR3199-2-201ENST00000636243 86 ntBASIC-0.16□□□□□ -2.44
RPL39P62891 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC-0.17□□□□□ -2.44
RPL39P62891 MIR411-201ENST00000362239 96 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 RNA5SP361-201ENST00000362686 118 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 SNORD44.1-201ENST00000363202 61 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 SNORD114-23-201ENST00000363536 72 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
RPL39P62891 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC-0.17□□□□□ -2.44
RPL39P62891 ZYG11AP1-201ENST00000430329 837 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 OFD1P13Y-201ENST00000431179 1232 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 AL445305.1-201ENST00000432577 575 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 HSPE1P13-201ENST00000451143 297 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 RFC5P1-201ENST00000454419 874 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPL39P62891 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPL39P62891 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.17□□□□□ -2.44
RPL39P62891 AF213884.2-201ENST00000510417 903 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 NRON-201ENST00000517270 370 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPL39P62891 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPL39P62891 AP003327.1-201ENST00000529684 127 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.17□□□□□ -2.44
RPL39P62891 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.17□□□□□ -2.44
RPL39P62891 MIR3199-1-201ENST00000582434 88 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC-0.17□□□□□ -2.44
RPL39P62891 AC023932.2-201ENST00000603176 175 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 MIR7157-201ENST00000635801 60 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 AL513185.3-201ENST00000433335 1300 ntBASIC-0.17□□□□□ -2.44
RPL39P62891 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
RPL39P62891 DDX43P2-201ENST00000604753 1354 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms