Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC023043.2-201ENST00000589678 1026 ntBASIC0.93□□□□□ -2.26
LSM3P62310 BNIP3P33-201ENST00000598912 569 ntBASIC0.93□□□□□ -2.26
LSM3P62310 CLIC4P2-201ENST00000601934 717 ntBASIC0.93□□□□□ -2.26
LSM3P62310 AL139344.1-201ENST00000605228 195 ntBASIC0.93□□□□□ -2.26
LSM3P62310 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
LSM3P62310 DUSP12P1-201ENST00000612874 516 ntBASIC0.93□□□□□ -2.26
LSM3P62310 AL596245.1-201ENST00000618994 362 ntBASIC0.93□□□□□ -2.26
LSM3P62310 AP003476.1-201ENST00000623984 516 ntBASIC0.93□□□□□ -2.26
LSM3P62310 AC079416.3-201ENST00000624479 549 ntBASIC0.93□□□□□ -2.26
LSM3P62310 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.93□□□□□ -2.26
LSM3P62310 AP000776.1-201ENST00000530032 1663 ntBASIC0.93□□□□□ -2.26
LSM3P62310 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.93□□□□□ -2.26
LSM3P62310 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.93□□□□□ -2.26
LSM3P62310 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
LSM3P62310 Y_RNA.67-201ENST00000362870 100 ntBASIC0.92□□□□□ -2.26
LSM3P62310 RNU6-492P-201ENST00000363035 104 ntBASIC0.92□□□□□ -2.26
LSM3P62310 Y_RNA.245-201ENST00000364493 95 ntBASIC0.92□□□□□ -2.26
LSM3P62310 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
LSM3P62310 RNU2-48P-201ENST00000410694 191 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.92□□□□□ -2.26
LSM3P62310 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.92□□□□□ -2.26
LSM3P62310 BX119904.4-201ENST00000424402 301 ntBASIC0.92□□□□□ -2.26
LSM3P62310 VN1R42P-201ENST00000424651 344 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AL035407.1-201ENST00000429211 571 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.92□□□□□ -2.26
LSM3P62310 RPS15AP17-201ENST00000470598 390 ntBASIC0.92□□□□□ -2.26
LSM3P62310 UBE2DNL-203ENST00000474922 222 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AC108729.2-201ENST00000476543 840 ntBASIC0.92□□□□□ -2.26
LSM3P62310 TMEM251P1-201ENST00000503717 318 ntBASIC0.92□□□□□ -2.26
LSM3P62310 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.92□□□□□ -2.26
LSM3P62310 SNORA44.1-201ENST00000517031 108 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.92□□□□□ -2.26
LSM3P62310 COPS8P3-201ENST00000526024 482 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AP000916.1-201ENST00000533869 835 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.92□□□□□ -2.26
LSM3P62310 AC079598.5-201ENST00000547460 117 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AC104229.1-201ENST00000561364 255 ntBASIC0.92□□□□□ -2.26
LSM3P62310 MIR4303-201ENST00000581299 66 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.92□□□□□ -2.26
LSM3P62310 AC011451.2-201ENST00000604303 598 ntBASIC0.92□□□□□ -2.26
LSM3P62310 AC011939.3-201ENST00000613686 466 ntBASIC0.92□□□□□ -2.26
LSM3P62310 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.92□□□□□ -2.26
LSM3P62310 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.92□□□□□ -2.26
LSM3P62310 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
LSM3P62310 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.92□□□□□ -2.26
LSM3P62310 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
LSM3P62310 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
LSM3P62310 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
LSM3P62310 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
LSM3P62310 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.91□□□□□ -2.26
LSM3P62310 MRPL35P3-201ENST00000421557 364 ntBASIC0.91□□□□□ -2.26
LSM3P62310 AL135790.2-201ENST00000437701 267 ntBASIC0.91□□□□□ -2.26
LSM3P62310 CR769776.1-201ENST00000441254 787 ntBASIC0.91□□□□□ -2.26
LSM3P62310 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.91□□□□□ -2.26
LSM3P62310 MTCYBP11-201ENST00000447254 1109 ntBASIC0.91□□□□□ -2.26
LSM3P62310 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.91□□□□□ -2.26
LSM3P62310 OFD1P3Y-201ENST00000453312 783 ntBASIC0.91□□□□□ -2.26
LSM3P62310 RPL30P12-201ENST00000474666 353 ntBASIC0.91□□□□□ -2.26
LSM3P62310 BOLA3P3-201ENST00000505182 232 ntBASIC0.91□□□□□ -2.26
LSM3P62310 AC005832.3-201ENST00000537929 631 ntBASIC0.91□□□□□ -2.26
LSM3P62310 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.91□□□□□ -2.26
LSM3P62310 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
LSM3P62310 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.91□□□□□ -2.26
LSM3P62310 AC092140.2-201ENST00000618027 521 ntBASIC0.91□□□□□ -2.26
LSM3P62310 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
LSM3P62310 RNU6-353P-201ENST00000364266 108 ntBASIC0.9□□□□□ -2.27
LSM3P62310 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
LSM3P62310 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
LSM3P62310 RNA5SP100-201ENST00000410903 110 ntBASIC0.9□□□□□ -2.27
LSM3P62310 RNA5SP59-201ENST00000410922 110 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.9□□□□□ -2.27
LSM3P62310 C1DP1-201ENST00000426049 402 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AC092634.2-201ENST00000428146 1010 ntBASIC0.9□□□□□ -2.27
LSM3P62310 RPL7P34-201ENST00000433316 712 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AL354941.1-201ENST00000438600 464 ntBASIC0.9□□□□□ -2.27
LSM3P62310 RNFT1P2-201ENST00000443064 757 ntBASIC0.9□□□□□ -2.27
LSM3P62310 GDI2P2-201ENST00000445131 608 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.9□□□□□ -2.27
LSM3P62310 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.9□□□□□ -2.27
LSM3P62310 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.9□□□□□ -2.27
LSM3P62310 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.9□□□□□ -2.27
LSM3P62310 BX322784.1-201ENST00000455793 1077 ntBASIC0.9□□□□□ -2.27
LSM3P62310 RPL36AP21-201ENST00000490372 323 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AL133373.1-201ENST00000497098 94 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AC116337.1-201ENST00000509680 687 ntBASIC0.9□□□□□ -2.27
LSM3P62310 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.9□□□□□ -2.27
LSM3P62310 RPL21P5-201ENST00000554662 472 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AL390208.1-201ENST00000605885 644 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.9□□□□□ -2.27
LSM3P62310 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.9□□□□□ -2.27
LSM3P62310 VN1R9P-201ENST00000614184 867 ntBASIC0.9□□□□□ -2.27
LSM3P62310 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.9□□□□□ -2.27
LSM3P62310 AC017037.3-201ENST00000625016 472 ntBASIC0.9□□□□□ -2.27
LSM3P62310 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.9□□□□□ -2.27
LSM3P62310 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LSM3P62310 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.9□□□□□ -2.27
LSM3P62310 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.89□□□□□ -2.27
LSM3P62310 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
LSM3P62310 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.89□□□□□ -2.27
LSM3P62310 RNU6-271P-201ENST00000363858 105 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms