Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC113347.3-201ENST00000509113 148 ntBASIC1.55□□□□□ -2.16
ACTBP60709 MTND2P31-201ENST00000512602 616 ntBASIC1.55□□□□□ -2.16
ACTBP60709 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTBP60709 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTBP60709 YWHAZP1-201ENST00000556286 722 ntBASIC1.55□□□□□ -2.16
ACTBP60709 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.55□□□□□ -2.16
ACTBP60709 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTBP60709 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.55□□□□□ -2.16
ACTBP60709 MIR3124-201ENST00000582636 67 ntBASIC1.55□□□□□ -2.16
ACTBP60709 VN1R83P-201ENST00000595685 445 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AL158827.2-201ENST00000602494 330 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.55□□□□□ -2.16
ACTBP60709 SNRPGP19-201ENST00000603826 189 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AC090186.1-201ENST00000605991 572 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AF129408.1-201ENST00000608767 431 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTBP60709 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
ACTBP60709 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.55□□□□□ -2.16
ACTBP60709 AL691447.3-201ENST00000635020 330 ntBASIC1.55□□□□□ -2.16
ACTBP60709 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
ACTBP60709 Z75746.1-201ENST00000440243 2080 ntBASIC1.54□□□□□ -2.16
ACTBP60709 RNU5E-1-201ENST00000362477 120 ntBASIC1.54□□□□□ -2.16
ACTBP60709 RNU6-224P-201ENST00000384055 107 ntBASIC1.54□□□□□ -2.16
ACTBP60709 MIR504-201ENST00000385065 83 ntBASIC1.54□□□□□ -2.16
ACTBP60709 AC019129.1-201ENST00000403786 261 ntBASIC1.54□□□□□ -2.16
ACTBP60709 RNU4-26P-201ENST00000410270 107 ntBASIC1.54□□□□□ -2.16
ACTBP60709 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.54□□□□□ -2.16
ACTBP60709 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.54□□□□□ -2.16
ACTBP60709 USP9YP11-201ENST00000427537 717 ntBASIC1.54□□□□□ -2.16
ACTBP60709 HSPE1P21-201ENST00000438283 308 ntBASIC1.54□□□□□ -2.16
ACTBP60709 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.54□□□□□ -2.16
ACTBP60709 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ACTBP60709 AC008837.2-201ENST00000513076 418 ntBASIC1.54□□□□□ -2.16
ACTBP60709 SNORA4.4-201ENST00000515921 135 ntBASIC1.54□□□□□ -2.16
ACTBP60709 SNORA31.3-201ENST00000516029 96 ntBASIC1.54□□□□□ -2.16
ACTBP60709 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.54□□□□□ -2.16
ACTBP60709 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.54□□□□□ -2.16
ACTBP60709 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ACTBP60709 AL133153.1-201ENST00000557756 303 ntBASIC1.54□□□□□ -2.16
ACTBP60709 AL512347.1-201ENST00000566420 503 ntBASIC1.54□□□□□ -2.16
ACTBP60709 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ACTBP60709 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.54□□□□□ -2.16
ACTBP60709 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.54□□□□□ -2.16
ACTBP60709 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.54□□□□□ -2.16
ACTBP60709 AC004987.4-201ENST00000603383 338 ntBASIC1.54□□□□□ -2.16
ACTBP60709 AC104763.2-201ENST00000604179 382 ntBASIC1.54□□□□□ -2.16
ACTBP60709 AC126118.1-201ENST00000607744 628 ntBASIC1.54□□□□□ -2.16
ACTBP60709 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.54□□□□□ -2.16
ACTBP60709 AC099842.1-201ENST00000619919 596 ntBASIC1.54□□□□□ -2.16
ACTBP60709 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.54□□□□□ -2.16
ACTBP60709 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
ACTBP60709 NACAP2-201ENST00000318548 624 ntBASIC1.53□□□□□ -2.16
ACTBP60709 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ACTBP60709 MIR95-201ENST00000385072 81 ntBASIC1.53□□□□□ -2.16
ACTBP60709 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.53□□□□□ -2.16
ACTBP60709 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.53□□□□□ -2.16
ACTBP60709 BTF3L4P3-201ENST00000418879 476 ntBASIC1.53□□□□□ -2.16
ACTBP60709 AC097463.2-201ENST00000421074 142 ntBASIC1.53□□□□□ -2.16
ACTBP60709 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.53□□□□□ -2.16
ACTBP60709 RPL7P34-201ENST00000433316 712 ntBASIC1.53□□□□□ -2.16
ACTBP60709 GTF2IP3-201ENST00000433887 494 ntBASIC1.53□□□□□ -2.16
ACTBP60709 RPL23AP76-201ENST00000441860 458 ntBASIC1.53□□□□□ -2.16
ACTBP60709 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.53□□□□□ -2.16
ACTBP60709 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.53□□□□□ -2.16
ACTBP60709 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.53□□□□□ -2.16
ACTBP60709 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.53□□□□□ -2.16
ACTBP60709 SNORA48.11-201ENST00000517015 89 ntBASIC1.53□□□□□ -2.16
ACTBP60709 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.53□□□□□ -2.16
ACTBP60709 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.53□□□□□ -2.16
ACTBP60709 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.53□□□□□ -2.16
ACTBP60709 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.53□□□□□ -2.16
ACTBP60709 AC084824.5-201ENST00000612009 413 ntBASIC1.53□□□□□ -2.16
ACTBP60709 AC008121.3-201ENST00000618726 433 ntBASIC1.53□□□□□ -2.16
ACTBP60709 AC123767.1-202ENST00000620407 817 ntBASIC1.53□□□□□ -2.16
ACTBP60709 AL359757.2-201ENST00000624309 274 ntBASIC1.53□□□□□ -2.16
ACTBP60709 AC116618.1-201ENST00000634617 774 ntBASIC1.53□□□□□ -2.16
ACTBP60709 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.53□□□□□ -2.16
ACTBP60709 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ACTBP60709 SNORD114-1-201ENST00000362705 72 ntBASIC1.52□□□□□ -2.17
ACTBP60709 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AL021407.1-201ENST00000404531 386 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AL359634.1-202ENST00000404721 284 ntBASIC1.52□□□□□ -2.17
ACTBP60709 RPL21P24-201ENST00000413752 448 ntBASIC1.52□□□□□ -2.17
ACTBP60709 EIF4EP2-201ENST00000422816 654 ntBASIC1.52□□□□□ -2.17
ACTBP60709 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ACTBP60709 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.52□□□□□ -2.17
ACTBP60709 GPM6BP2-201ENST00000432046 144 ntBASIC1.52□□□□□ -2.17
ACTBP60709 SNRPEP7-201ENST00000438350 220 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.52□□□□□ -2.17
ACTBP60709 GPM6BP1-201ENST00000446387 144 ntBASIC1.52□□□□□ -2.17
ACTBP60709 ZNF886P-201ENST00000450781 723 ntBASIC1.52□□□□□ -2.17
ACTBP60709 FABP5P13-201ENST00000452144 328 ntBASIC1.52□□□□□ -2.17
ACTBP60709 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.52□□□□□ -2.17
ACTBP60709 snoU13.15-201ENST00000459407 104 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AC093809.1-201ENST00000509155 340 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.52□□□□□ -2.17
ACTBP60709 SMURF2P1-201ENST00000514992 481 ntBASIC1.52□□□□□ -2.17
ACTBP60709 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.52□□□□□ -2.17
ACTBP60709 AC112198.4-201ENST00000515450 351 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms