Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RPL32P35-201ENST00000415214 394 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN20P56880 AC093151.1-201ENST00000427711 313 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN20P56880 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN20P56880 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN20P56880 NFU1P2-201ENST00000448700 469 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 RN7SL807P-201ENST00000470923 297 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN20P56880 RPS29P25-201ENST00000481709 171 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN20P56880 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN20P56880 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN20P56880 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN20P56880 AL133241.1-201ENST00000556832 487 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 AL157871.3-201ENST00000557231 293 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN20P56880 MIR5680-201ENST00000577577 84 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 MIR1273C-201ENST00000578669 77 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 AC073657.2-201ENST00000605661 303 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN20P56880 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN20P56880 AL442067.2-201ENST00000614033 363 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 AL138880.2-201ENST00000616214 239 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 SNORD39.4-201ENST00000620099 78 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLDN20P56880 AC073346.2-201ENST00000624724 2058 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLDN20P56880 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN20P56880 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN20P56880 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CLDN20P56880 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN20P56880 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN20P56880 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN20P56880 RNU6-1283P-201ENST00000365314 105 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 RNU6-395P-201ENST00000365662 106 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN20P56880 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN20P56880 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CLDN20P56880 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN20P56880 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN20P56880 SNORA11.1-201ENST00000408133 129 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 EEF1A1P40-201ENST00000412883 573 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 BMS1P22-201ENST00000414726 313 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN20P56880 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN20P56880 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 RPL21P41-201ENST00000459863 264 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN20P56880 RPL31P58-201ENST00000469001 379 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN20P56880 AC110794.1-201ENST00000505816 425 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN20P56880 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.93□□□□□ -1.94
CLDN20P56880 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN20P56880 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN20P56880 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.93□□□□□ -1.94
CLDN20P56880 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN20P56880 MIR548AC-201ENST00000585049 88 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 MIR4424-201ENST00000585257 86 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN20P56880 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN20P56880 AL157817.1-201ENST00000614264 790 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 uc_338.34-201ENST00000617467 174 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 AC099506.2-201ENST00000623074 221 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN20P56880 MIR3662-201ENST00000637030 95 ntBASIC2.93□□□□□ -1.94
CLDN20P56880 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CLDN20P56880 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLDN20P56880 AL079305.1-201ENST00000623159 3008 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 RNU6-1127P-201ENST00000384580 107 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 SNORA46-201ENST00000384762 135 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLDN20P56880 AL139039.1-201ENST00000401900 692 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 RNA5SP118-201ENST00000410385 109 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 RNA5SP38-201ENST00000410750 119 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN20P56880 UQCRHP3-201ENST00000451503 251 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN20P56880 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN20P56880 RPL12P25-201ENST00000455592 494 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 SCARNA18-201ENST00000459004 134 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 RN7SL504P-201ENST00000494496 287 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.92□□□□□ -1.94
CLDN20P56880 AC091885.1-201ENST00000506658 268 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 MTCO3P9-201ENST00000506989 781 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.92□□□□□ -1.94
CLDN20P56880 AC104136.1-201ENST00000512969 394 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 LRRC34P2-201ENST00000514850 553 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 RNU6-928P-201ENST00000516876 104 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 MTND4P7-201ENST00000523876 130 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN20P56880 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN20P56880 AC234778.2-201ENST00000566241 354 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 MIR5692A1-201ENST00000580523 69 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.92□□□□□ -1.94
CLDN20P56880 MIR5195-201ENST00000583555 115 ntBASIC2.92□□□□□ -1.94
CLDN20P56880 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms