Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PER3P56645 RNU6-593P-201ENST00000364716 112 ntBASIC3.72□□□□□ -1.81
PER3P56645 DEFB109C-201ENST00000382575 264 ntBASIC3.72□□□□□ -1.81
PER3P56645 DEFB109B-201ENST00000382656 264 ntBASIC3.72□□□□□ -1.81
PER3P56645 RNU6-1197P-201ENST00000391183 107 ntBASIC3.72□□□□□ -1.81
PER3P56645 SNORD66.1-201ENST00000391230 76 ntBASIC3.72□□□□□ -1.81
PER3P56645 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PER3P56645 Y_RNA.646-201ENST00000410980 101 ntBASIC3.72□□□□□ -1.81
PER3P56645 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.72□□□□□ -1.81
PER3P56645 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.72□□□□□ -1.81
PER3P56645 AL590383.1-201ENST00000428602 75 ntBASIC3.72□□□□□ -1.81
PER3P56645 NDUFB4P6-201ENST00000436819 366 ntBASIC3.72□□□□□ -1.81
PER3P56645 Z82210.1-201ENST00000440037 231 ntBASIC3.72□□□□□ -1.81
PER3P56645 AL500522.2-201ENST00000448562 343 ntBASIC3.72□□□□□ -1.81
PER3P56645 ABCF2P2-201ENST00000450549 296 ntBASIC3.72□□□□□ -1.81
PER3P56645 RPL30P15-201ENST00000457129 321 ntBASIC3.72□□□□□ -1.81
PER3P56645 RNU7-187P-201ENST00000458985 68 ntBASIC3.72□□□□□ -1.81
PER3P56645 HMGN1P10-201ENST00000474557 553 ntBASIC3.72□□□□□ -1.81
PER3P56645 HMGB1P30-201ENST00000492455 606 ntBASIC3.72□□□□□ -1.81
PER3P56645 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.72□□□□□ -1.81
PER3P56645 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.72□□□□□ -1.81
PER3P56645 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.72□□□□□ -1.81
PER3P56645 AC096745.1-201ENST00000509945 370 ntBASIC3.72□□□□□ -1.81
PER3P56645 Y_RNA.670-201ENST00000516255 105 ntBASIC3.72□□□□□ -1.81
PER3P56645 SCARNA13-201ENST00000516672 275 ntBASIC3.72□□□□□ -1.81
PER3P56645 RNA5SP468-201ENST00000516782 93 ntBASIC3.72□□□□□ -1.81
PER3P56645 AC069113.1-201ENST00000517763 267 ntBASIC3.72□□□□□ -1.81
PER3P56645 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.72□□□□□ -1.81
PER3P56645 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.72□□□□□ -1.81
PER3P56645 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.72□□□□□ -1.81
PER3P56645 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.72□□□□□ -1.81
PER3P56645 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.72□□□□□ -1.81
PER3P56645 AC022655.2-201ENST00000577280 318 ntBASIC3.72□□□□□ -1.81
PER3P56645 AC244505.7-201ENST00000599675 272 ntBASIC3.72□□□□□ -1.81
PER3P56645 AP000654.2-201ENST00000605633 586 ntBASIC3.72□□□□□ -1.81
PER3P56645 AC138627.2-201ENST00000624202 601 ntBASIC3.72□□□□□ -1.81
PER3P56645 AL669831.3-213ENST00000636676 183 ntBASIC3.72□□□□□ -1.81
PER3P56645 AC012442.3-202ENST00000636742 206 ntBASIC3.72□□□□□ -1.81
PER3P56645 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PER3P56645 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PER3P56645 AC032011.1-201ENST00000611703 1549 ntBASIC3.71□□□□□ -1.82
PER3P56645 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.71□□□□□ -1.82
PER3P56645 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PER3P56645 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.71□□□□□ -1.82
PER3P56645 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PER3P56645 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PER3P56645 MIR412-201ENST00000362142 91 ntBASIC3.71□□□□□ -1.82
PER3P56645 SNORD62.1-201ENST00000362541 86 ntBASIC3.71□□□□□ -1.82
PER3P56645 RNA5SP119-201ENST00000362715 117 ntBASIC3.71□□□□□ -1.82
PER3P56645 Y_RNA.146-201ENST00000363549 102 ntBASIC3.71□□□□□ -1.82
PER3P56645 Y_RNA.162-201ENST00000363683 102 ntBASIC3.71□□□□□ -1.82
PER3P56645 SNORD14B-201ENST00000364533 90 ntBASIC3.71□□□□□ -1.82
PER3P56645 Y_RNA.404-201ENST00000383978 102 ntBASIC3.71□□□□□ -1.82
PER3P56645 SNORA75.4-201ENST00000391278 119 ntBASIC3.71□□□□□ -1.82
PER3P56645 RNA5SP129-201ENST00000410276 118 ntBASIC3.71□□□□□ -1.82
PER3P56645 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.71□□□□□ -1.82
PER3P56645 UBE2V1P4-201ENST00000425374 344 ntBASIC3.71□□□□□ -1.82
PER3P56645 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.71□□□□□ -1.82
PER3P56645 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.71□□□□□ -1.82
PER3P56645 HMGN2P7-201ENST00000456186 273 ntBASIC3.71□□□□□ -1.82
PER3P56645 Y_RNA.653-201ENST00000459091 95 ntBASIC3.71□□□□□ -1.82
PER3P56645 Y_RNA.631-201ENST00000459607 101 ntBASIC3.71□□□□□ -1.82
PER3P56645 AC006517.1-201ENST00000480485 328 ntBASIC3.71□□□□□ -1.82
PER3P56645 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
PER3P56645 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.71□□□□□ -1.82
PER3P56645 AC104576.1-201ENST00000524225 88 ntBASIC3.71□□□□□ -1.82
PER3P56645 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.71□□□□□ -1.82
PER3P56645 AC018462.2-201ENST00000605375 395 ntBASIC3.71□□□□□ -1.82
PER3P56645 AC004805.2-201ENST00000605382 482 ntBASIC3.71□□□□□ -1.82
PER3P56645 AL161423.1-201ENST00000613700 262 ntBASIC3.71□□□□□ -1.82
PER3P56645 U7.8-201ENST00000619968 63 ntBASIC3.71□□□□□ -1.82
PER3P56645 AC007823.1-201ENST00000569932 1566 ntBASIC3.71□□□□□ -1.82
PER3P56645 AL359693.1-201ENST00000614959 2407 ntBASIC3.71□□□□□ -1.82
PER3P56645 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.7□□□□□ -1.82
PER3P56645 Y_RNA.197-201ENST00000364004 102 ntBASIC3.7□□□□□ -1.82
PER3P56645 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PER3P56645 RNU6-692P-201ENST00000384496 107 ntBASIC3.7□□□□□ -1.82
PER3P56645 RNU6-306P-201ENST00000384617 107 ntBASIC3.7□□□□□ -1.82
PER3P56645 MIR559-201ENST00000385188 96 ntBASIC3.7□□□□□ -1.82
PER3P56645 RNU6-328P-201ENST00000390887 106 ntBASIC3.7□□□□□ -1.82
PER3P56645 SNORA40C-201ENST00000391285 128 ntBASIC3.7□□□□□ -1.82
PER3P56645 SNORA11.2-201ENST00000408318 127 ntBASIC3.7□□□□□ -1.82
PER3P56645 RNU4-6P-201ENST00000410804 122 ntBASIC3.7□□□□□ -1.82
PER3P56645 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.7□□□□□ -1.82
PER3P56645 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.7□□□□□ -1.82
PER3P56645 AL645568.3-201ENST00000433683 316 ntBASIC3.7□□□□□ -1.82
PER3P56645 AC092573.2-201ENST00000434546 243 ntBASIC3.7□□□□□ -1.82
PER3P56645 NOTCH2P1-201ENST00000443481 624 ntBASIC3.7□□□□□ -1.82
PER3P56645 NDUFB1P2-201ENST00000449477 176 ntBASIC3.7□□□□□ -1.82
PER3P56645 AL583843.1-201ENST00000456070 346 ntBASIC3.7□□□□□ -1.82
PER3P56645 RPS23P3-201ENST00000470993 430 ntBASIC3.7□□□□□ -1.82
PER3P56645 RPL21P13-201ENST00000488305 481 ntBASIC3.7□□□□□ -1.82
PER3P56645 RPL29P14-201ENST00000495837 428 ntBASIC3.7□□□□□ -1.82
PER3P56645 HMGN1P11-201ENST00000508668 303 ntBASIC3.7□□□□□ -1.82
PER3P56645 NDUFB4P9-201ENST00000511646 388 ntBASIC3.7□□□□□ -1.82
PER3P56645 RNA5SP291-201ENST00000517222 105 ntBASIC3.7□□□□□ -1.82
PER3P56645 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.7□□□□□ -1.82
PER3P56645 IGKV2D-19-201ENST00000523346 262 ntBASIC3.7□□□□□ -1.82
PER3P56645 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.7□□□□□ -1.82
PER3P56645 CYCSP30-201ENST00000546447 172 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms