Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.22□□□□□ -1.89
FOXG1P55316 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
FOXG1P55316 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
FOXG1P55316 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
FOXG1P55316 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.21□□□□□ -1.9
FOXG1P55316 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.21□□□□□ -1.9
FOXG1P55316 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXG1P55316 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
FOXG1P55316 SNORD9-201ENST00000362566 104 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RNU6-490P-201ENST00000362985 107 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 Y_RNA.396-201ENST00000383949 103 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 Y_RNA.428-201ENST00000384078 102 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RNU4-70P-201ENST00000384579 139 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RNU6-306P-201ENST00000384617 107 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 MIR670-201ENST00000390142 98 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 SNORA16.2-201ENST00000390991 127 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RNU6-516P-201ENST00000411381 104 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.21□□□□□ -1.9
FOXG1P55316 MTCO3P45-201ENST00000443036 613 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 snoU109.4-201ENST00000458953 143 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 AC117503.1-201ENST00000472241 394 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RPL23AP55-201ENST00000498163 452 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.21□□□□□ -1.9
FOXG1P55316 AC022493.2-201ENST00000506122 481 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 HMGN1P11-201ENST00000508668 303 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RNU2-58P-201ENST00000516403 183 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 SCARNA16.2-201ENST00000516520 172 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RNA5SP384-201ENST00000516615 116 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 SNORD116.3-201ENST00000517176 78 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RNU1-54P-201ENST00000517181 120 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.21□□□□□ -1.9
FOXG1P55316 AC090115.3-201ENST00000553218 849 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 RPL23AP84-201ENST00000571193 464 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.21□□□□□ -1.9
FOXG1P55316 AC091925.2-201ENST00000625059 256 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.21□□□□□ -1.9
FOXG1P55316 AP000553.6-201ENST00000641242 118 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.21□□□□□ -1.9
FOXG1P55316 AC073073.2-201ENST00000609827 2578 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXG1P55316 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXG1P55316 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXG1P55316 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
FOXG1P55316 HSPA8P1-201ENST00000425843 1833 ntBASIC3.21□□□□□ -1.9
FOXG1P55316 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXG1P55316 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXG1P55316 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXG1P55316 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXG1P55316 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FOXG1P55316 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXG1P55316 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXG1P55316 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXG1P55316 Y_RNA.447-201ENST00000384184 113 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 RNU6-432P-201ENST00000384196 109 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 RNU6-823P-201ENST00000391042 103 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 RNU6-837P-201ENST00000391056 108 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 U3.29-201ENST00000391296 212 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXG1P55316 PTMAP5-201ENST00000393073 333 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 AL583834.1-201ENST00000406943 343 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 RNU6-101P-201ENST00000410323 104 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 ATP5A1P2-201ENST00000412323 255 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXG1P55316 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXG1P55316 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXG1P55316 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXG1P55316 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXG1P55316 RPL21P2-201ENST00000440049 481 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXG1P55316 AL136097.1-201ENST00000456945 913 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 SNORD97-201ENST00000459187 142 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 AC008571.1-201ENST00000467232 300 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 AL049830.2-201ENST00000480072 201 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 AC068781.1-201ENST00000488231 618 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXG1P55316 SNORA14.1-201ENST00000516113 141 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 RNU6-27P-201ENST00000516146 107 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 RNU6-1069P-201ENST00000516612 133 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 AC026403.1-201ENST00000518938 295 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 RANP3-201ENST00000530970 276 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXG1P55316 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXG1P55316 MIR4444-1-201ENST00000581696 74 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 MIR3941-201ENST00000582572 103 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 MIR4444-2-201ENST00000584390 74 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXG1P55316 U2.17-201ENST00000611454 95 ntBASIC3.2□□□□□ -1.9
FOXG1P55316 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXG1P55316 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
FOXG1P55316 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXG1P55316 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXG1P55316 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FOXG1P55316 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FOXG1P55316 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FOXG1P55316 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXG1P55316 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXG1P55316 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FOXG1P55316 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FOXG1P55316 Y_RNA.2-201ENST00000362330 96 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms