Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPS25P9-201ENST00000435591 252 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 MTND4P6-201ENST00000438297 472 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 RAP1BP2-201ENST00000478270 544 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 AC121161.1-201ENST00000510606 652 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 RNU4-77P-201ENST00000516692 156 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 AC023050.2-201ENST00000544968 387 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 AC092474.3-201ENST00000603022 568 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.35
CLTCL1P53675 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CLTCL1P53675 RNU6-272P-201ENST00000411028 104 ntBASIC0.34□□□□□ -2.36
CLTCL1P53675 RPL21P24-201ENST00000413752 448 ntBASIC0.34□□□□□ -2.36
CLTCL1P53675 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.34□□□□□ -2.36
CLTCL1P53675 CST2P1-201ENST00000425770 87 ntBASIC0.34□□□□□ -2.36
CLTCL1P53675 MTCO1P3-201ENST00000429327 192 ntBASIC0.34□□□□□ -2.36
CLTCL1P53675 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.34□□□□□ -2.36
CLTCL1P53675 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.34□□□□□ -2.36
CLTCL1P53675 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.34□□□□□ -2.36
CLTCL1P53675 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.34□□□□□ -2.36
CLTCL1P53675 SNORA44.1-201ENST00000517031 108 ntBASIC0.34□□□□□ -2.36
CLTCL1P53675 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.34□□□□□ -2.36
CLTCL1P53675 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.34□□□□□ -2.36
CLTCL1P53675 VN1R82P-201ENST00000601481 356 ntBASIC0.34□□□□□ -2.36
CLTCL1P53675 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.33□□□□□ -2.36
CLTCL1P53675 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CLTCL1P53675 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.33□□□□□ -2.36
CLTCL1P53675 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CLTCL1P53675 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CLTCL1P53675 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CLTCL1P53675 PSMC1P5-201ENST00000512850 177 ntBASIC0.33□□□□□ -2.36
CLTCL1P53675 AC136628.3-201ENST00000521868 290 ntBASIC0.33□□□□□ -2.36
CLTCL1P53675 AP006587.4-201ENST00000526053 529 ntBASIC0.33□□□□□ -2.36
CLTCL1P53675 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.33□□□□□ -2.36
CLTCL1P53675 MIR5190-201ENST00000581537 80 ntBASIC0.33□□□□□ -2.36
CLTCL1P53675 XIAPP1-201ENST00000603162 600 ntBASIC0.33□□□□□ -2.36
CLTCL1P53675 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CLTCL1P53675 AC073569.3-201ENST00000619055 682 ntBASIC0.33□□□□□ -2.36
CLTCL1P53675 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CLTCL1P53675 U3.13-201ENST00000364804 214 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.32□□□□□ -2.36
CLTCL1P53675 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 AL096803.2-201ENST00000450032 677 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.32□□□□□ -2.36
CLTCL1P53675 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.32□□□□□ -2.36
CLTCL1P53675 SNORA31.8-201ENST00000516327 108 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 AC005668.1-201ENST00000571142 476 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 VN1R81P-201ENST00000602085 372 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 AL355472.4-201ENST00000610233 626 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 SDAD1P2-201ENST00000441308 2028 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 AC110491.1-201ENST00000562191 2010 ntBASIC0.32□□□□□ -2.36
CLTCL1P53675 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CLTCL1P53675 Y_RNA.167-201ENST00000363735 109 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 SNORA8-201ENST00000384574 139 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 snoU13.4-201ENST00000458916 104 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.31□□□□□ -2.36
CLTCL1P53675 AL078605.1-201ENST00000603529 500 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CLTCL1P53675 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CLTCL1P53675 AC016716.1-201ENST00000265882 708 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 SNRPEP3-201ENST00000338402 276 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 RPS3AP37-201ENST00000419176 745 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.31□□□□□ -2.36
CLTCL1P53675 SCARNA16.2-201ENST00000516520 172 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 RN7SKP5-201ENST00000517045 272 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.31□□□□□ -2.36
CLTCL1P53675 MIR4802-201ENST00000581881 80 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 AP001269.3-201ENST00000588718 329 ntBASIC0.31□□□□□ -2.36
CLTCL1P53675 Y_RNA.67-201ENST00000362870 100 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 MIR767-201ENST00000390228 109 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 AL109913.1-201ENST00000421173 514 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 Z95118.1-201ENST00000421372 247 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 AL645638.1-201ENST00000440519 361 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.3□□□□□ -2.36
CLTCL1P53675 AC005741.1-201ENST00000511094 432 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.3□□□□□ -2.36
CLTCL1P53675 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.3□□□□□ -2.36
CLTCL1P53675 AC069304.3-201ENST00000603938 1084 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 AL138726.1-201ENST00000614873 333 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 AC018755.4-201ENST00000619715 454 ntBASIC0.3□□□□□ -2.36
CLTCL1P53675 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
CLTCL1P53675 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.29□□□□□ -2.36
CLTCL1P53675 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.29□□□□□ -2.36
CLTCL1P53675 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.29□□□□□ -2.36
CLTCL1P53675 AP003717.3-201ENST00000544832 1180 ntBASIC0.29□□□□□ -2.36
CLTCL1P53675 MIR4422-201ENST00000581938 83 ntBASIC0.29□□□□□ -2.36
CLTCL1P53675 uc_338.22-201ENST00000622722 187 ntBASIC0.29□□□□□ -2.36
CLTCL1P53675 AC116563.2-201ENST00000624751 535 ntBASIC0.29□□□□□ -2.36
CLTCL1P53675 RNU6-666P-201ENST00000363499 107 ntBASIC0.28□□□□□ -2.36
CLTCL1P53675 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
CLTCL1P53675 MIR30A-201ENST00000385092 71 ntBASIC0.28□□□□□ -2.36
CLTCL1P53675 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.28□□□□□ -2.36
CLTCL1P53675 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.28□□□□□ -2.36
CLTCL1P53675 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CLTCL1P53675 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.28□□□□□ -2.36
CLTCL1P53675 AC024060.1-201ENST00000607052 494 ntBASIC0.28□□□□□ -2.36
CLTCL1P53675 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
CLTCL1P53675 AL355810.1-201ENST00000614629 552 ntBASIC0.28□□□□□ -2.36
CLTCL1P53675 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
CLTCL1P53675 Y_RNA.549-201ENST00000384657 102 ntBASIC0.27□□□□□ -2.37
CLTCL1P53675 RNU6-1328P-201ENST00000410938 106 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms