Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.28□□□□□ -2.2
NUP98P52948 LARP7P2-201ENST00000575306 125 ntBASIC1.28□□□□□ -2.2
NUP98P52948 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.28□□□□□ -2.2
NUP98P52948 AC008749.1-201ENST00000597650 306 ntBASIC1.28□□□□□ -2.2
NUP98P52948 AL391813.1-201ENST00000603098 260 ntBASIC1.28□□□□□ -2.2
NUP98P52948 AC110491.1-201ENST00000562191 2010 ntBASIC1.28□□□□□ -2.21
NUP98P52948 RNU6-1078P-201ENST00000364522 103 ntBASIC1.27□□□□□ -2.21
NUP98P52948 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
NUP98P52948 CISD1P1-201ENST00000393907 327 ntBASIC1.27□□□□□ -2.21
NUP98P52948 VN1R36P-201ENST00000414936 291 ntBASIC1.27□□□□□ -2.21
NUP98P52948 SDCBPP1-201ENST00000440192 890 ntBASIC1.27□□□□□ -2.21
NUP98P52948 RPL23AP6-201ENST00000446637 472 ntBASIC1.27□□□□□ -2.21
NUP98P52948 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.27□□□□□ -2.21
NUP98P52948 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.27□□□□□ -2.21
NUP98P52948 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.27□□□□□ -2.21
NUP98P52948 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.27□□□□□ -2.21
NUP98P52948 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.27□□□□□ -2.21
NUP98P52948 MIR4714-201ENST00000580728 77 ntBASIC1.27□□□□□ -2.21
NUP98P52948 AC108706.1-201ENST00000611053 297 ntBASIC1.27□□□□□ -2.21
NUP98P52948 AL773524.1-201ENST00000614065 229 ntBASIC1.27□□□□□ -2.21
NUP98P52948 AC091932.3-201ENST00000624223 323 ntBASIC1.27□□□□□ -2.21
NUP98P52948 AL590396.4-201ENST00000636779 956 ntBASIC1.27□□□□□ -2.21
NUP98P52948 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
NUP98P52948 SNORD56.4-201ENST00000363883 71 ntBASIC1.26□□□□□ -2.21
NUP98P52948 NDUFS5P4-201ENST00000412983 318 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.26□□□□□ -2.21
NUP98P52948 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.26□□□□□ -2.21
NUP98P52948 AC005297.2-201ENST00000450430 606 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.26□□□□□ -2.21
NUP98P52948 AC108059.3-201ENST00000456388 214 ntBASIC1.26□□□□□ -2.21
NUP98P52948 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.26□□□□□ -2.21
NUP98P52948 RPL21P47-201ENST00000483696 477 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AL049874.1-201ENST00000489560 388 ntBASIC1.26□□□□□ -2.21
NUP98P52948 SNORA31.6-201ENST00000516241 130 ntBASIC1.26□□□□□ -2.21
NUP98P52948 RNU6-405P-201ENST00000516637 110 ntBASIC1.26□□□□□ -2.21
NUP98P52948 RNU6-467P-201ENST00000517027 110 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.26□□□□□ -2.21
NUP98P52948 OR5AL2P-201ENST00000532185 920 ntBASIC1.26□□□□□ -2.21
NUP98P52948 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.26□□□□□ -2.21
NUP98P52948 AC008121.1-201ENST00000603244 268 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AC091946.2-201ENST00000606105 291 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.26□□□□□ -2.21
NUP98P52948 AC024257.5-201ENST00000612739 531 ntBASIC1.26□□□□□ -2.21
NUP98P52948 MIR3199-2-201ENST00000636243 86 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AC132825.7-201ENST00000638744 335 ntBASIC1.26□□□□□ -2.21
NUP98P52948 RNU6-492P-201ENST00000363035 104 ntBASIC1.26□□□□□ -2.21
NUP98P52948 SNORD114-26-201ENST00000363543 72 ntBASIC1.26□□□□□ -2.21
NUP98P52948 MIR520E-201ENST00000384867 87 ntBASIC1.26□□□□□ -2.21
NUP98P52948 MIR561-201ENST00000385216 97 ntBASIC1.26□□□□□ -2.21
NUP98P52948 RPS20P15-201ENST00000412792 311 ntBASIC1.26□□□□□ -2.21
NUP98P52948 PPP1R11P2-201ENST00000423543 382 ntBASIC1.26□□□□□ -2.21
NUP98P52948 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.26□□□□□ -2.21
NUP98P52948 VN1R10P-201ENST00000447106 875 ntBASIC1.26□□□□□ -2.21
NUP98P52948 SNRPFP3-201ENST00000457792 225 ntBASIC1.26□□□□□ -2.21
NUP98P52948 FABP5P5-201ENST00000515537 406 ntBASIC1.26□□□□□ -2.21
NUP98P52948 RNA5SP384-201ENST00000516615 116 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AP005639.2-201ENST00000527592 928 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AC092140.2-201ENST00000618027 521 ntBASIC1.26□□□□□ -2.21
NUP98P52948 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.26□□□□□ -2.21
NUP98P52948 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.26□□□□□ -2.21
NUP98P52948 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
NUP98P52948 SNORD65C-201ENST00000390962 71 ntBASIC1.25□□□□□ -2.21
NUP98P52948 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.25□□□□□ -2.21
NUP98P52948 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.25□□□□□ -2.21
NUP98P52948 AC007000.2-201ENST00000442564 487 ntBASIC1.25□□□□□ -2.21
NUP98P52948 COX6CP18-201ENST00000448769 222 ntBASIC1.25□□□□□ -2.21
NUP98P52948 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.25□□□□□ -2.21
NUP98P52948 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.25□□□□□ -2.21
NUP98P52948 AL132857.1-201ENST00000555180 708 ntBASIC1.25□□□□□ -2.21
NUP98P52948 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.25□□□□□ -2.21
NUP98P52948 AC133794.1-201ENST00000602731 914 ntBASIC1.25□□□□□ -2.21
NUP98P52948 AP002906.1-201ENST00000603405 233 ntBASIC1.25□□□□□ -2.21
NUP98P52948 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.25□□□□□ -2.21
NUP98P52948 AL589743.7-201ENST00000612637 233 ntBASIC1.25□□□□□ -2.21
NUP98P52948 U2.21-201ENST00000637295 81 ntBASIC1.25□□□□□ -2.21
NUP98P52948 AL390862.1-201ENST00000635467 1469 ntBASIC1.24□□□□□ -2.21
NUP98P52948 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NUP98P52948 AC083799.1-201ENST00000366451 910 ntBASIC1.24□□□□□ -2.21
NUP98P52948 MIR532-201ENST00000385025 91 ntBASIC1.24□□□□□ -2.21
NUP98P52948 RNA5SP212-201ENST00000391223 107 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AL356421.1-201ENST00000403255 413 ntBASIC1.24□□□□□ -2.21
NUP98P52948 SNORD56-201ENST00000413522 71 ntBASIC1.24□□□□□ -2.21
NUP98P52948 SFR1P2-201ENST00000421841 730 ntBASIC1.24□□□□□ -2.21
NUP98P52948 RPL30P4-201ENST00000429309 333 ntBASIC1.24□□□□□ -2.21
NUP98P52948 MTND4LP7-201ENST00000431728 294 ntBASIC1.24□□□□□ -2.21
NUP98P52948 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.24□□□□□ -2.21
NUP98P52948 KATNBL1P3-201ENST00000443475 909 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.24□□□□□ -2.21
NUP98P52948 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AL160314.1-201ENST00000490836 438 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC010460.2-201ENST00000509054 677 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC091965.2-201ENST00000512324 613 ntBASIC1.24□□□□□ -2.21
NUP98P52948 RNU6-885P-201ENST00000516607 104 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC005261.5-201ENST00000596280 355 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC103810.9-201ENST00000606688 112 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC092953.2-201ENST00000608000 699 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC013476.2-201ENST00000614456 459 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC006213.5-201ENST00000619673 288 ntBASIC1.24□□□□□ -2.21
NUP98P52948 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
NUP98P52948 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms