Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.03□□□□□ -2.24
GTF2A1P52655 AL121882.1-201ENST00000422893 417 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 MTND2P6-201ENST00000455337 1030 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 snoU13.15-201ENST00000459407 104 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.03□□□□□ -2.24
GTF2A1P52655 BOLA3P3-201ENST00000505182 232 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
GTF2A1P52655 NRON-201ENST00000517270 370 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 CYCSP27-201ENST00000527643 293 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 AC090502.2-201ENST00000549267 280 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 AL121821.2-201ENST00000556081 394 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 AL713866.2-201ENST00000603579 219 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 AL357094.1-201ENST00000603845 844 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 AC012676.2-201ENST00000619258 186 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 AC080188.3-201ENST00000624842 748 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 MTCO1P9-201ENST00000505577 1534 ntBASIC1.03□□□□□ -2.24
GTF2A1P52655 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
GTF2A1P52655 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
GTF2A1P52655 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
GTF2A1P52655 RNU5E-1-201ENST00000362477 120 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 RNU5E-8P-201ENST00000363502 116 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 MIR29C-201ENST00000385231 88 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AL590084.1-201ENST00000407885 387 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AC092634.6-201ENST00000418558 192 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.02□□□□□ -2.25
GTF2A1P52655 AL590233.1-201ENST00000430017 456 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 MTND2P5-201ENST00000432656 1006 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AL135790.2-201ENST00000437701 267 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AL022238.1-201ENST00000442557 355 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.02□□□□□ -2.25
GTF2A1P52655 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
GTF2A1P52655 RNU6-667P-201ENST00000517186 102 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AP000873.5-201ENST00000533906 236 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AP003034.1-201ENST00000534621 422 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AC084364.2-201ENST00000546924 395 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AC027807.1-201ENST00000559921 996 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.02□□□□□ -2.25
GTF2A1P52655 AC133794.1-201ENST00000602731 914 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AF129408.1-201ENST00000608767 431 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 MIR8074-201ENST00000615081 81 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 AC004009.2-201ENST00000623016 728 ntBASIC1.02□□□□□ -2.25
GTF2A1P52655 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
GTF2A1P52655 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 ZNF680P1-201ENST00000436625 1469 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 MFSD8-213ENST00000641134 1327 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
GTF2A1P52655 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.01□□□□□ -2.25
GTF2A1P52655 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.01□□□□□ -2.25
GTF2A1P52655 AL353706.1-201ENST00000436728 494 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 PRPS1P1-201ENST00000445305 876 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 snoU13.9-201ENST00000458927 103 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.01□□□□□ -2.25
GTF2A1P52655 AC117522.2-201ENST00000510049 657 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 RNA5SP290-201ENST00000517133 127 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.01□□□□□ -2.25
GTF2A1P52655 MTCO2P15-201ENST00000532655 656 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.01□□□□□ -2.25
GTF2A1P52655 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.01□□□□□ -2.25
GTF2A1P52655 AC012213.3-201ENST00000577199 777 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.01□□□□□ -2.25
GTF2A1P52655 AC008121.3-201ENST00000618726 433 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 AC006213.5-201ENST00000619673 288 ntBASIC1.01□□□□□ -2.25
GTF2A1P52655 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
GTF2A1P52655 AL391516.1-201ENST00000554380 2449 ntBASIC1□□□□□ -2.25
GTF2A1P52655 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1□□□□□ -2.25
GTF2A1P52655 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1□□□□□ -2.25
GTF2A1P52655 RNU6-661P-201ENST00000362409 107 ntBASIC1□□□□□ -2.25
GTF2A1P52655 RNU6-457P-201ENST00000363999 107 ntBASIC1□□□□□ -2.25
GTF2A1P52655 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1□□□□□ -2.25
GTF2A1P52655 RNU1-39P-201ENST00000383897 165 ntBASIC1□□□□□ -2.25
GTF2A1P52655 MIR146A-201ENST00000385201 99 ntBASIC1□□□□□ -2.25
GTF2A1P52655 RPL26P27-201ENST00000414397 437 ntBASIC1□□□□□ -2.25
GTF2A1P52655 BTF3P4-201ENST00000418852 495 ntBASIC1□□□□□ -2.25
GTF2A1P52655 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1□□□□□ -2.25
GTF2A1P52655 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1□□□□□ -2.25
GTF2A1P52655 AC112771.1-201ENST00000463581 102 ntBASIC1□□□□□ -2.25
GTF2A1P52655 RPS15AP17-201ENST00000470598 390 ntBASIC1□□□□□ -2.25
GTF2A1P52655 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1□□□□□ -2.25
GTF2A1P52655 AL160314.1-201ENST00000490836 438 ntBASIC1□□□□□ -2.25
GTF2A1P52655 AC018437.1-201ENST00000492214 406 ntBASIC1□□□□□ -2.25
GTF2A1P52655 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1□□□□□ -2.25
GTF2A1P52655 RPL23AP94-201ENST00000512518 302 ntBASIC1□□□□□ -2.25
GTF2A1P52655 RNU6-528P-201ENST00000516926 100 ntBASIC1□□□□□ -2.25
GTF2A1P52655 MIR4421-201ENST00000578133 69 ntBASIC1□□□□□ -2.25
GTF2A1P52655 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1□□□□□ -2.25
GTF2A1P52655 AC023043.2-201ENST00000589678 1026 ntBASIC1□□□□□ -2.25
GTF2A1P52655 BNIP3P24-201ENST00000593398 557 ntBASIC1□□□□□ -2.25
GTF2A1P52655 AC073413.2-201ENST00000604332 360 ntBASIC1□□□□□ -2.25
GTF2A1P52655 NDUFA8P1-201ENST00000605525 367 ntBASIC1□□□□□ -2.25
GTF2A1P52655 AC013412.1-201ENST00000610687 192 ntBASIC1□□□□□ -2.25
GTF2A1P52655 AC017037.3-201ENST00000625016 472 ntBASIC1□□□□□ -2.25
GTF2A1P52655 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
GTF2A1P52655 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1□□□□□ -2.25
GTF2A1P52655 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
GTF2A1P52655 OR5T3-201ENST00000303059 1023 ntBASIC0.99□□□□□ -2.25
GTF2A1P52655 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
GTF2A1P52655 RNU6-1032P-201ENST00000384100 107 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms