Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RPS15AP9-201ENST00000439856 381 ntBASIC2.96□□□□□ -1.94
CLK1P49759 USP9YP15-201ENST00000442391 422 ntBASIC2.96□□□□□ -1.94
CLK1P49759 AL136380.1-201ENST00000447970 162 ntBASIC2.96□□□□□ -1.94
CLK1P49759 RPL12P25-201ENST00000455592 494 ntBASIC2.96□□□□□ -1.94
CLK1P49759 AC091153.1-201ENST00000466297 402 ntBASIC2.96□□□□□ -1.94
CLK1P49759 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.96□□□□□ -1.94
CLK1P49759 RPL23AP41-201ENST00000484754 458 ntBASIC2.96□□□□□ -1.94
CLK1P49759 AC008549.1-201ENST00000512900 643 ntBASIC2.96□□□□□ -1.94
CLK1P49759 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.96□□□□□ -1.94
CLK1P49759 RNA5SP337-201ENST00000517007 109 ntBASIC2.96□□□□□ -1.94
CLK1P49759 RNA5SP290-201ENST00000517133 127 ntBASIC2.96□□□□□ -1.94
CLK1P49759 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.96□□□□□ -1.94
CLK1P49759 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.96□□□□□ -1.94
CLK1P49759 AC090572.1-201ENST00000519251 160 ntBASIC2.96□□□□□ -1.94
CLK1P49759 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.96□□□□□ -1.94
CLK1P49759 AP000907.2-201ENST00000530827 353 ntBASIC2.96□□□□□ -1.94
CLK1P49759 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.96□□□□□ -1.94
CLK1P49759 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.96□□□□□ -1.94
CLK1P49759 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLK1P49759 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.96□□□□□ -1.94
CLK1P49759 AC005476.1-201ENST00000554427 397 ntBASIC2.96□□□□□ -1.94
CLK1P49759 SUB1P2-201ENST00000556401 297 ntBASIC2.96□□□□□ -1.94
CLK1P49759 MIR4429-201ENST00000580105 73 ntBASIC2.96□□□□□ -1.94
CLK1P49759 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.96□□□□□ -1.94
CLK1P49759 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.96□□□□□ -1.94
CLK1P49759 TUG1_2.1-201ENST00000614234 87 ntBASIC2.96□□□□□ -1.94
CLK1P49759 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.96□□□□□ -1.94
CLK1P49759 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CLK1P49759 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.95□□□□□ -1.94
CLK1P49759 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLK1P49759 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLK1P49759 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.95□□□□□ -1.94
CLK1P49759 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
CLK1P49759 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLK1P49759 SNORA20.2-201ENST00000383922 131 ntBASIC2.95□□□□□ -1.94
CLK1P49759 AC068050.1-201ENST00000394891 380 ntBASIC2.95□□□□□ -1.94
CLK1P49759 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLK1P49759 RPS4XP8-201ENST00000402039 771 ntBASIC2.95□□□□□ -1.94
CLK1P49759 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.95□□□□□ -1.94
CLK1P49759 RNU6-908P-201ENST00000410160 94 ntBASIC2.95□□□□□ -1.94
CLK1P49759 AC007064.1-201ENST00000412238 351 ntBASIC2.95□□□□□ -1.94
CLK1P49759 NDUFS5P4-201ENST00000412983 318 ntBASIC2.95□□□□□ -1.94
CLK1P49759 USP9YP27-201ENST00000418455 438 ntBASIC2.95□□□□□ -1.94
CLK1P49759 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.95□□□□□ -1.94
CLK1P49759 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.95□□□□□ -1.94
CLK1P49759 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLK1P49759 FDX1P2-201ENST00000450769 375 ntBASIC2.95□□□□□ -1.94
CLK1P49759 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.95□□□□□ -1.94
CLK1P49759 RPL37P6-201ENST00000460682 294 ntBASIC2.95□□□□□ -1.94
CLK1P49759 MTCO2P29-201ENST00000465212 189 ntBASIC2.95□□□□□ -1.94
CLK1P49759 AC023194.1-201ENST00000493084 308 ntBASIC2.95□□□□□ -1.94
CLK1P49759 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.95□□□□□ -1.94
CLK1P49759 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLK1P49759 AC117522.1-201ENST00000509821 380 ntBASIC2.95□□□□□ -1.94
CLK1P49759 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.95□□□□□ -1.94
CLK1P49759 RNU6-358P-201ENST00000516564 75 ntBASIC2.95□□□□□ -1.94
CLK1P49759 SNORA20.3-201ENST00000516880 132 ntBASIC2.95□□□□□ -1.94
CLK1P49759 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.95□□□□□ -1.94
CLK1P49759 AC104383.1-201ENST00000530297 370 ntBASIC2.95□□□□□ -1.94
CLK1P49759 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLK1P49759 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.95□□□□□ -1.94
CLK1P49759 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.95□□□□□ -1.94
CLK1P49759 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
CLK1P49759 uc_338.12-201ENST00000616344 181 ntBASIC2.95□□□□□ -1.94
CLK1P49759 AC007998.5-201ENST00000622938 237 ntBASIC2.95□□□□□ -1.94
CLK1P49759 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.95□□□□□ -1.94
CLK1P49759 MTND4P27-201ENST00000450813 1354 ntBASIC2.95□□□□□ -1.94
CLK1P49759 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLK1P49759 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLK1P49759 Y_RNA.38-201ENST00000362617 102 ntBASIC2.94□□□□□ -1.94
CLK1P49759 SNORA72.1-201ENST00000363485 129 ntBASIC2.94□□□□□ -1.94
CLK1P49759 SNORA67.1-201ENST00000364749 141 ntBASIC2.94□□□□□ -1.94
CLK1P49759 Y_RNA.295-201ENST00000364918 102 ntBASIC2.94□□□□□ -1.94
CLK1P49759 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CLK1P49759 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.94□□□□□ -1.94
CLK1P49759 RNU1-138P-201ENST00000384093 164 ntBASIC2.94□□□□□ -1.94
CLK1P49759 MIR524-201ENST00000385242 87 ntBASIC2.94□□□□□ -1.94
CLK1P49759 U3.26-201ENST00000391236 204 ntBASIC2.94□□□□□ -1.94
CLK1P49759 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.94□□□□□ -1.94
CLK1P49759 RNU4-47P-201ENST00000410876 114 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.94□□□□□ -1.94
CLK1P49759 AL096701.2-201ENST00000416920 238 ntBASIC2.94□□□□□ -1.94
CLK1P49759 MTATP6P18-201ENST00000417994 673 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AL139413.1-201ENST00000421309 217 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.94□□□□□ -1.94
CLK1P49759 TIMM9P1-201ENST00000436122 256 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AC107626.1-201ENST00000471084 183 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AC090096.1-201ENST00000489168 390 ntBASIC2.94□□□□□ -1.94
CLK1P49759 MTCYBP18-201ENST00000501056 747 ntBASIC2.94□□□□□ -1.94
CLK1P49759 SCARNA17.1-201ENST00000516211 143 ntBASIC2.94□□□□□ -1.94
CLK1P49759 SCARNA17.2-201ENST00000516334 143 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.94□□□□□ -1.94
CLK1P49759 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.94□□□□□ -1.94
CLK1P49759 MTND1P35-201ENST00000526739 508 ntBASIC2.94□□□□□ -1.94
CLK1P49759 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.94□□□□□ -1.94
CLK1P49759 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.94□□□□□ -1.94
CLK1P49759 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.94□□□□□ -1.94
CLK1P49759 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.94□□□□□ -1.94
CLK1P49759 MIR4446-201ENST00000578505 67 ntBASIC2.94□□□□□ -1.94
CLK1P49759 MIR1254-2-201ENST00000579553 63 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms